Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1111 ATGTCTGTAACTCTGCACACCAATCTCGGCGATATCAAGTGCGAGATCTTCTGCGACGAGGTCCCCAAGGCTTCCGAGAATTTTTTAGCACTATGTGCGAGTGGTTATTATGATGGGACAATTTTTCACCGCAACATCAAAGGTTTTATGATTCAAGGTGGAGATCCAACTGGTACTGGCAAAGGGGGCACCAGTATATGGGGCAAAAAATTTAACGACGAGATTAGAGAATCTCTCAAGCACAATGCGAGGGGGATATTGTCAATGGCCAACAGTGGTCCGAATACTAATGGAAGCCAATTTTTCATATCGTATGCAAAGCAGCCACATTTGAATGGACTATATACTGTGTTTGGCAAAGTAATTCATGGATTCGAAGTACTTGATCTCATGGAAAAGACTCAAACAGGCCCAGGGGATCGACCACTTGCTGAGATAAGGCTAAACCGAGTAACAATACATGCTAATCCACTGGCTGGTTAG 483 0.4389 MSVTLHTNLGDIKCEIFCDEVPKASENFLALCASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGKVIHGFEVLDLMEKTQTGPGDRPLAEIRLNRVTIHANPLAG 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1111 160 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 6 153 IPR002130 GO:0000413|GO:0003755
Acco07g1111 160 SUPERFAMILY Cyclophilin-like 1 157 IPR029000 -
Acco07g1111 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 IPR002130 GO:0000413|GO:0003755
Acco07g1111 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 112 IPR002130 GO:0000413|GO:0003755
Acco07g1111 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 IPR002130 GO:0000413|GO:0003755
Acco07g1111 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 IPR002130 GO:0000413|GO:0003755
Acco07g1111 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 IPR002130 GO:0000413|GO:0003755
Acco07g1111 160 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 152 IPR002130 GO:0000413|GO:0003755
Acco07g1111 160 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 37 54 IPR020892 GO:0003755|GO:0006457
Acco07g1111 160 CDD Cyclophilin_PPIL3_like 1 153 - -
Acco07g1111 160 PIRSF Peptidylpro_ismrse 1 157 IPR024936 GO:0003755
Acco07g1111 160 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 153 IPR044666 -
Acco07g1111 160 FunFam Peptidyl-prolyl cis-trans isomerase 1 160 - -
Acco07g1111 160 Gene3D - 1 160 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1111 Acco-ChrAcco07 16861435 16866702 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1111 3 157 U-box Gene Family AT5G67530 54.194 8.83e-56 182