Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1095 ATGGCGGCGGACGATCTTCCTGCTCAGAGTGTAGCAGGGTCGACGGCGGCAAATTCCTCGGAGAGGCGACATCTTTCCATATTCGAACTACCGCCTAACTTTTTTCACTCCTGCCGCCTCCTTGCTTCTCCTCAATCGTCCACTTCCGACAACCTTCAGAATTGCAATGACGCAGTCCGCGAAACCCTTGACCTTATTGAGAACGACGCTAATGGATCCCAAGATGTTGTTGTTTCAATGCTCAGGTGGACTTGCAATACTTGCAAGGATCAATTTGAGTCCCTTCAAGACCAGCGTTTGCATTTCAAGTCGGATATTCATCGTTTCAATGTGAAGTTGACAATGGCTGGAAAGAATATTGTTAAGGAAGAAGATTTTGAGCTGCTGACATCTGATTCTATTAGAGACTATGATGTTTCGAGTATATCAGGATCAGAAGAAGACGATGATGACAACAAAATTGAAACTAAGAGACAAAATGTTCGTAATAAATCAAGTGAAAGTTTTAGGCAAAAGTTATTTATCTGCCTTACGACAGGGGAGAGAGTCTCTGTTTGGAAGTGCTTAATAATGAATATGGGTGAGAATGTACTGAATGAGAATGAAGTGATCGAGAGGTTGAAGTCTTTGACTCTTGAACCCAGGAATAATTCTCGCTTTAGAATTGTGCTGCTTGCATCTGGTGGGCACTTTGCAGGTGGTGTGTTTGATGGTAATGAGCTTGTGGCTCACAAGACATTCCACAGATATGTTGTGAGGGCCAAGGCAGGGAAAAAACAGTCATCAAAAGATGCTACTGGCAGAGCTGCTCATTCTGCTGGGGCTTCACTCCGTCGCCACAATGAACTTGCATTAAAGAAGGATATTCAAGAGCTGCTTACTGCTTGGAGAAATTATTTTGATGCTTCGGATTGTATATTTCTACATGCTCCATCAAGTAGTCGTCAACTGCTATTTGATGTAGAGAAACCATATTTTAGCAATCATCGTAATGTTATTAGAAACATTCCATTGACTGTTCGAAGGCCTACTTTAAGAGAAGCAAAACGTGTATTTAACCAGTTGTCTCAAGTATCCTATGAATCGGAAGAGGATTTAGGGTCAACACCCATTACTGTAAGAAATGCCAACCCAGCCATTGACAAGGAGGCCTTTACAAACTTAGATAGCAAGGATAAAAATGAGGCTTGTTCGAGTAAACAAGATAATATTGAACTCCTTATTTCAAGCACGAGTGAGAGTGAAGATGGGATAGTAGGTAAATCAACTCCTTTACATCAAGCCTCACAATCTGGTGACTCTCACAAGGTTTTGGAGCTACTGGAACAGGGCATGGATCCCTGCATGAAAGATGAAAGAGGAAGGACCCCTTATATGTTGGCGCATGATAAGGAAGTGAGGAATACTTTCAGAAGGTTCATGGCATCAAACCTTGAAAAATGGGATTGGCATGCAGCAAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCAGCTAAGCAGGCTGAAAAAGATGCCAAGAAAAAAGCCAGAGCTAAAGAATTAAAAAAATTACGTAAAGCAAAAGAAAAAAAGGCTCAGGCTGAAGCTGCTAAGAATGCTTCCAAAACTGCGGAAAACCAAGTGAATGCTTCAACGTCTTATCAGAAAGGACAATCTCAACCCAACAGTGGGTTGAAATTATCTAAAGAGGAGGAATCGAGAAGAGCTCAGGCTGAAGAAAGAGAGAAGAGAGCAGCAGCTGCAGAGAGAAGGCTTGCTGCCCTCAAGATTCAAGGTGGCGGTGTGACCACTGTCCCGGGCACTTCAGAACCAAAAAGTGGAGCAGCCGGCGACATATATTGCTCCTGTTGTAATACCTCACTTGCCGGTAAAGTTCCATTCCACAGGTATAATTATAAATACTGCAGCACTTCATGCATGCATGTCCACAGGGAGATCTTAGAGGATGGGTGA 1965 0.428 MAADDLPAQSVAGSTAANSSERRHLSIFELPPNFFHSCRLLASPQSSTSDNLQNCNDAVRETLDLIENDANGSQDVVVSMLRWTCNTCKDQFESLQDQRLHFKSDIHRFNVKLTMAGKNIVKEEDFELLTSDSIRDYDVSSISGSEEDDDDNKIETKRQNVRNKSSESFRQKLFICLTTGERVSVWKCLIMNMGENVLNENEVIERLKSLTLEPRNNSRFRIVLLASGGHFAGGVFDGNELVAHKTFHRYVVRAKAGKKQSSKDATGRAAHSAGASLRRHNELALKKDIQELLTAWRNYFDASDCIFLHAPSSSRQLLFDVEKPYFSNHRNVIRNIPLTVRRPTLREAKRVFNQLSQVSYESEEDLGSTPITVRNANPAIDKEAFTNLDSKDKNEACSSKQDNIELLISSTSESEDGIVGKSTPLHQASQSGDSHKVLELLEQGMDPCMKDERGRTPYMLAHDKEVRNTFRRFMASNLEKWDWHAAKVPSALTKEMEESQAAKQAEKDAKKKARAKELKKLRKAKEKKAQAEAAKNASKTAENQVNASTSYQKGQSQPNSGLKLSKEEESRRAQAEEREKRAAAAERRLAALKIQGGGVTTVPGTSEPKSGAAGDIYCSCCNTSLAGKVPFHRYNYKYCSTSCMHVHREILEDG 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1095 654 ProSitePatterns Zinc finger C2H2 type domain signature. 85 107 IPR013087 -
Acco07g1095 654 Coils Coil 496 544 - -
Acco07g1095 654 SUPERFAMILY Ankyrin repeat 401 473 IPR036770 -
Acco07g1095 654 MobiDBLite consensus disorder prediction 499 513 - -
Acco07g1095 654 MobiDBLite consensus disorder prediction 536 563 - -
Acco07g1095 654 Coils Coil 565 595 - -
Acco07g1095 654 Pfam Bacteroidetes VLRF1 release factor 222 360 IPR041175 -
Acco07g1095 654 MobiDBLite consensus disorder prediction 564 584 - -
Acco07g1095 654 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 17 653 IPR047139 -
Acco07g1095 654 MobiDBLite consensus disorder prediction 140 159 - -
Acco07g1095 654 MobiDBLite consensus disorder prediction 494 584 - -
Acco07g1095 654 MobiDBLite consensus disorder prediction 413 432 - -
Acco07g1095 654 Gene3D - 380 484 IPR036770 -
Acco07g1095 654 ProSiteProfiles Ankyrin repeat profile. 420 452 IPR002110 GO:0005515
Acco07g1095 654 Pfam Vms1-associating treble clef domain 617 649 IPR041540 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1095 17 601 C2H2 Transcription Factor Family AT1G01930 53.897 0.0 566