Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1025 ATGCTCTCCTTGTCCCTGCAACAGAGTAAAATAATGCTTTTTACAGGAGAATCTTCTGACACTACTCCTTACATTAGAGAAGAGAGAGAACTGAGAAGCTTCATTTTTGAATTTGGCTTCCATTATATTCTGGAGCTTGAAAACGAAGCTACATTGAGTTGGTTTCTCAATCTTAAAGCTGGGGAGAAGAAGATCAAATTGGAATCTGATGTGTTTGAAGAGGGTGAATCTTTTGAATGTTGCTTGAATCAATTTGACTTGAAGACTCGTGGAACATGGTTTGATAACAAAAAAATGGTGGAGCAAGGTGGAGAAGTCGATGATAACTATTCCATAGAAGACTGGTTCTTGCGAGCTCAAGAACTCGTACCTATTGCAATTAATAAGGCAGAAGAAGAGGTAAAGGGCTTTTCTGGTAGGTGGAAAGTGATTGTTTCAAAGATAGAACAGATCCCAACATGCTTATCAGACTTGTCTAGCCATCCTTGCTTCTCCAAGAATGCTCTTTGTAGGGAGCAATTGCAGGCCGTGTCGAAGACCCTGGAGGAAGCAATCCATTTGGCCGAGTTATGCGCAAAGGAGAGGTATGAAGGTAAGCTTCGAATGCAGAGTGATCTCGATGCTTTATCCGGGAAGTTGGATTTGAATTTACGAGATTGTCGGATTTTGATCAAGACCGGTGTCCTCGGCGAGTCCACTTTTCCTCTGGGTATGTCTAATGATATGAAACAAGGGAATGATGTGAGAGAATTATTTGCACGCCTTCAGATTGGTGACTTGGAGGCCAAGCACAGAGCTATAGATAGTCTTATTGAAGCAATGAAGGAAGAAGAAAAGAGTGTTATAGCTGTTGTAGGAAGAAGTCAAATTGCTTCTTTAGTTCAATTGTTAACGGCTACTTGTACTAGGATAAGGGAAAAAGCGGTTACTGTCATATGTTGTCTTGCAGAATCCGGTAACTGCGAGAATTGGCTTCTCTCTGAGGGAGTTTTGCCGCCTCTGATTCGGCTTATTGAATCTGGCGGTGCTGTTGGGGGAGAGAAGGCTGTGATATGTCTTCAGAGGCTGTCTATGTCAGAGGAATCGGCCCAAGAAATTGTCGGACACGGCGGGGTTAGGCCGATGATCGAGCTATGTCATAATGGGGATTCTGTGTCCCAATCTGTTGCTGCTTGTTGTTTGAAGAACATATCTGTTGTTCCTGAATTGAGACAAGCTTTGGCTCAAGAAGGAATTGTGGAGACCATGATCAATCTCCTTGATCACGGAATCATACCGGGATCCAAGGAATCTGCTTCAGAGTGCTTACAGAATCTCACATCAAGCAATGAGAATCTAAGAAGGTCTGTCATATCAGAAGGTGGTGCTAAAAGCCTTCTTGCTTATCTTGATTCTCCACTCCCTCAAGAATCAGCTGTCACAGCATTGAGGAATCTAGTTGGATCAATCGGGGATCGGGATTTGATCTCACTAGGCCTCCTTCCTCGTTTGATGCACGTGCTGAATTCGGGATCTCCCGGAGCTCAGCAGGCCGCCTTGTCGGTGATATGCCGGGTTTTGACCTCTTTCGATATGAAGAAAATGGTGGCTGAGGCCGGATTCATCCCACCACTCATCAAAATGCTGGAAGCTAAACCGAACGGCATGAGGGAATTGGCGGCACAAGCCGTTGCGAGCTTGATGACGGTTACACAAAACCGGAGGGAGGTGAGGAGGAATGATAAGAGTGTGCCAAATTTGGTTCAGTTGCTTGATTCAAGCCCACACAATACTGCAAAGAAATATGCAATTTCCTGTTTATGTTCACTTTCTTCAAGCAGGAAATGTAATAAGCTGATGATTGCTTATGGGGCAATTGGATATCTAAAGAAGCTTAAAGAGATGGACATTCCAGGAGCTACAATGCTACTTGATAGATTGGAAAGAGGGAAATTGAGAAGCTTATTTAGCAGAAAATGA 1959 0.437 MLSLSLQQSKIMLFTGESSDTTPYIREERELRSFIFEFGFHYILELENEATLSWFLNLKAGEKKIKLESDVFEEGESFECCLNQFDLKTRGTWFDNKKMVEQGGEVDDNYSIEDWFLRAQELVPIAINKAEEEVKGFSGRWKVIVSKIEQIPTCLSDLSSHPCFSKNALCREQLQAVSKTLEEAIHLAELCAKERYEGKLRMQSDLDALSGKLDLNLRDCRILIKTGVLGESTFPLGMSNDMKQGNDVRELFARLQIGDLEAKHRAIDSLIEAMKEEEKSVIAVVGRSQIASLVQLLTATCTRIREKAVTVICCLAESGNCENWLLSEGVLPPLIRLIESGGAVGGEKAVICLQRLSMSEESAQEIVGHGGVRPMIELCHNGDSVSQSVAACCLKNISVVPELRQALAQEGIVETMINLLDHGIIPGSKESASECLQNLTSSNENLRRSVISEGGAKSLLAYLDSPLPQESAVTALRNLVGSIGDRDLISLGLLPRLMHVLNSGSPGAQQAALSVICRVLTSFDMKKMVAEAGFIPPLIKMLEAKPNGMRELAAQAVASLMTVTQNRREVRRNDKSVPNLVQLLDSSPHNTAKKYAISCLCSLSSSRKCNKLMIAYGAIGYLKKLKEMDIPGATMLLDRLERGKLRSLFSRK 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1025 652 Coils Coil 257 280 - -
Acco07g1025 652 Gene3D - 245 631 IPR011989 -
Acco07g1025 652 SMART arm_5 442 481 IPR000225 GO:0005515
Acco07g1025 652 SMART arm_5 482 521 IPR000225 GO:0005515
Acco07g1025 652 SMART arm_5 359 399 IPR000225 GO:0005515
Acco07g1025 652 SMART arm_5 564 605 IPR000225 GO:0005515
Acco07g1025 652 SMART arm_5 522 562 IPR000225 GO:0005515
Acco07g1025 652 SMART arm_5 278 317 IPR000225 GO:0005515
Acco07g1025 652 SMART arm_5 400 441 IPR000225 GO:0005515
Acco07g1025 652 Pfam Armadillo/beta-catenin-like repeat 361 398 IPR000225 GO:0005515
Acco07g1025 652 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 411 455 IPR000225 GO:0005515
Acco07g1025 652 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 107 650 - -
Acco07g1025 652 SUPERFAMILY ARM repeat 249 610 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1025 Acco-ChrAcco07 13930786 13933898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1025 492 636 U-box Gene Family AT2G23140 30.137 1.07e-06 50.1