Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1008 ATGAGTTTTGGGGGTTTTCTCGAAAATAACTGGGGTGGTGGAGGAACTGGCGGAGGTGCCAGAATCGTCGCCGATATTATTCCTTACAGCAACGGCACCACCAACGATGATAGAATGCCATCGAGTGGTTCAATCTCACATCAGCCTCGTCTGGTCACAACAGCACCCACCACCACCATGGCCAAATCCATGTTCAACTCTCCAGGACTTTCTCTCGCACTTCAAACGAATCTTGACGAGCAGCAAGGGGATGTGAATAGAATGGGTGGAGATAGCTACGAGCCTAATGTTGGGTTGAGAAGAAGTAGAGAAGAAGAACACGAAAGCAGATCTGGCAGTGATAACATGGAAGGCCCCACTTCCGGCGACGATCAGGACGCCGCCGACAACCCTCCCCGGAAAAAACGCTATCACCGACATACCCCTCAGCAAATTCAAGAGCTCGAAGCTCTCTTCAAAGAGTGCCCACACCCAGATGAGAAACAAAGACTCGAACTTAGCCGAAGACTTTGCCTGGAAACCAGACAAGTCAAATTCTGGTTCCAAAATCGAAGAACCCAGATGAAGACCCAATTGGAGCGCCATGAGAACACTTTGCTGAGGCAAGAGAACGATAAACTGAGAGCAGAGAATATGTCTATAAGAGAAGCCATGAGGAATCCGATATGTTCAAATTGTGGAGGGCCAGCGATTATAGGCGAGATTTCTCTCGAAGAACAACACTTGAGGATTGAAAACGCTCGATTAAAGGATGAGTTAGACCGAGTTTGTGCTCTCGCCGGAAAGTTTCTGGGCCGACCCGTTTCTTCATCAACCGGTACGATGGGTCCTCCATTGCCCAACTCAAGCTTAGAACTCGGAGTTGGCATCAACGGGTTTGGTGGTATCAGTACTGTTCCTTCAACTTTGCATTTAGGGCCCGCAGATTTCGGGATTTCCAGCCAATTAGCCATGGTCCCTCCGGCGGCAACAACGACGACGGCGATGTCAAGACCACCGGGGAATTTGGTCGACAATAGGTCGATAGAGAGGTCTATGTTTCTGGAGCTTGCTTTGGCGGCCATGGATGAGCTGGTGAAGATGGTTCATACAGATGAACCTCTCTGGTTGAGAAGCTTAGAAGAAGGAGGAGGATCAAGAGAGATTCTGAATCATGAAGAGTATATGAGAACATTTACAAATCCTTGCATTGGAATAAGACCTAATGGCTTTGTCTCAGAAGCTTCTAGAGAAACTGGAATGGTTATCATCAACAGCTTGGCCCTTGTTGAGACCCTCATGGATTCAAATCGCTGGGCAGAAATGTTCCCTTATTTGATCGCCAGAACCTCCACCACCGAAGTAATCTCCGGTGGAATCAATGGAACCAGAAATGGTGCTCTCCAACTGATGCATGCGGAGCTACAGGTTCTATCGCCATTGGTGCCGGTAAGAGAGGTGAATTTTCTGAGATTCTGCAAGCAACACGCAGAGGGGGTGTGGGCTGTGGTGGATGTATCGATAGACTCGATTATTCGAGAAGCTTCTGGAACGCCATCGTTTATGAACAACTGTGGTTGTAGGAGGCTTCCTTCTGGGTGCCTTGTTCAAGATATGCCAAATGGCTACTCCAAGGTGACATGGGTGGAACATGCAGAATACGATGAAAGCCAAGTCCACCAACTCTATAGACCCTTGTTGAGCTCAGGCATGGGCTACGGTGCTCAACGGTGGGTCGCCACCCTGCAACGCCAATGTGAATGCCTCGCCATCTTAATGTCCTCCTCCGTCCCCTCTCGAGATCACAGTGCTGCCATAACGGCTGGTGGCCGGCGGAGCATGTTGAAGCTAGCACAGCGAATGACCAACAATTTTTGTGCCGGAGTTTGCGCTTCCACCGTGCACAAGTGGAACAAGCTGAACGCCGGGAATGTCGACGAGGATGTCAGGGTGATGACTCGGAAGAGCGTGGATGATCCCGGCGAGCCTCCGGGGATAGTTTTAAGTGCAGCCACCTCCGTTTGGCTTCCGTTTTCACCCCAGAGACTGTTTGATTTCCTACGTGATGAACGCCTCAGAAGTGAATGGGACATACTCTCAAACGGTGGGCCCATGCAAGAGATGGCCCACATCGCTAAAGGCCAAGACCACGGCAATTGCGTCTCTCTCCTACGAGCCAGTGCGATGAATGCAAACCAGAGTAGCATGCTTATACTGCAGGAGACGTGCATAGACGCGGCAGGGTCGCTTGTGGTGTACGCGCCAGTGGATATCCCGGCCATGCATGTGGTTATGAACGGCGGCGACTCGGCTTACGTGGCGTTATTGCCGTCTGGGTTTGCCATAGTCCCGGATGGACCAGGGTCGCGTGGGTCCCAAACGCCGGCGAGCAACGGGAACACGAGCAACGGCGGCGTGAATGGAAGGGTAAGTGGGTCCCTCCTGACGGTGGCATTTCAAATCCTCGTGAATAGCCTCCCTACAGCCAAGCTCACGGTGGAATCGGTGGAGACGGTGAACAACCTCATCTCGTGCACCGTTCAGAAAATAAAGGCCGCTCTTCACTGTGAAAGCTGA 2556 0.5129 MSFGGFLENNWGGGGTGGGARIVADIIPYSNGTTNDDRMPSSGSISHQPRLVTTAPTTTMAKSMFNSPGLSLALQTNLDEQQGDVNRMGGDSYEPNVGLRRSREEEHESRSGSDNMEGPTSGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIREAMRNPICSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSSTGTMGPPLPNSSLELGVGINGFGGISTVPSTLHLGPADFGISSQLAMVPPAATTTTAMSRPPGNLVDNRSIERSMFLELALAAMDELVKMVHTDEPLWLRSLEEGGGSREILNHEEYMRTFTNPCIGIRPNGFVSEASRETGMVIINSLALVETLMDSNRWAEMFPYLIARTSTTEVISGGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDSIIREASGTPSFMNNCGCRRLPSGCLVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGMGYGAQRWVATLQRQCECLAILMSSSVPSRDHSAAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPFSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGSQTPASNGNTSNGGVNGRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1008 851 MobiDBLite consensus disorder prediction 97 113 - -
Acco07g1008 851 SUPERFAMILY Homeodomain-like 118 191 IPR009057 -
Acco07g1008 851 MobiDBLite consensus disorder prediction 783 798 - -
Acco07g1008 851 CDD START_ArGLABRA2_like 344 580 - -
Acco07g1008 851 SUPERFAMILY Bet v1-like 610 844 - -
Acco07g1008 851 SMART START_1 349 581 IPR002913 GO:0008289
Acco07g1008 851 MobiDBLite consensus disorder prediction 82 141 - -
Acco07g1008 851 FunFam Homeobox-leucine zipper protein GLABRA 2 349 580 - -
Acco07g1008 851 SMART HOX_1 132 195 IPR001356 GO:0003677
Acco07g1008 851 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 130 848 IPR042160 -
Acco07g1008 851 MobiDBLite consensus disorder prediction 779 798 - -
Acco07g1008 851 Gene3D - 120 207 - -
Acco07g1008 851 Coils Coil 185 220 - -
Acco07g1008 851 ProSitePatterns 'Homeobox' domain signature. 166 189 IPR017970 GO:0000981|GO:0006355
Acco07g1008 851 ProSiteProfiles START domain profile. 340 584 IPR002913 GO:0008289
Acco07g1008 851 FunFam Homeobox-leucine zipper protein HDG1 121 207 - -
Acco07g1008 851 Pfam START domain 349 581 IPR002913 GO:0008289
Acco07g1008 851 CDD homeodomain 133 191 IPR001356 GO:0003677
Acco07g1008 851 ProSiteProfiles 'Homeobox' domain profile. 131 191 IPR001356 GO:0003677
Acco07g1008 851 SUPERFAMILY Bet v1-like 342 581 - -
Acco07g1008 851 Pfam Homeodomain 134 189 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1008 Acco-ChrAcco07 13638463 13644716 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1008 1 851 Homeobox Transcription Factor Family AT3G61150 64.925 0.0 1038
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Acco07g1008 START 2.9e-52 CL0209