LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco07g0992	ATGCGCCACAACCTTGCGGGGCTGTGGATCTCTCTGCTCGCGATCTTCACCACCGCAGTTCATTGCAGGACTGACTCCCAGGATGTTTCAGCCCTCAATGGGATGTATTCCAGTTTAACATCTCATTCTCAATTAGAAGGCTGGAAATCAAGTGGGGGTGATCCTTGCGGCGACTCGTGGAAAGGAATCAAATGCTCAGGCTCATCGGTCACAAAAATAGATCTGTCTGGCCTGGGACTTACTGGATCAATGGGCTACCAGCTAGCAAACATGGCATCAGTTACCCACTTGGACTTGAGCAAAAACAACCTTAATGGTGATCTACCGTATCAACTTCCCCCAAATTCTCGGTACATTGATCTTTCCAAGAATAGCTTCACTGGAGTGGTTCCTTTTTCCATTTCTGAGATGACCAACCTTAACACCCTAAATCTTGCGCATAATCAACTCAATAATCAGCTGGGTGATATGTTTGGGAAACTCACTAAACTCAAACTAATGCATTTATCATTCAATTCAATGTCAGGAAATTTGCCGCAGAGTTTAAAATCACTCTTAAGCCTCAAAAAGTTGGATCTTCAAAATAATCAATTCTCAGGTTCAATAAATGTGCTTGCGAACCTTCCACTTGAAGAGTTGAATGTTGAAAATAACAAATTTTCTGGTTGGATCCCAACAAAGCTAAAGAATATAAGTAGCTTGCGAACTGGAGGAAACTCTTGGTCAACAGGCCCAGCTCCTCCTCCTCCTGAAAAGGGAATTGGGAAACCTGCTGTTATTGGAATTGTTATAGGAAGCATAGCTTTTGTTTTGCTCGTAGTTAGTGTTGTTGCTGTTGTTAAAAAAAGATCATCTCCACCTACTTCAAGATTTCTTGATGAAGAGCATAACCATCATAGATCTCCTACTCCTCTTGCATCTCAGGAATTATCCAAAAATGTTTCTGAATTTAATCCTTCGGATTCTGCTTTGATTGACATTAAGGCGTTACCAGAAGTTCCATCATCTAGTGCGAGGTCATCGGCTTCTGATTGTGTACAAACCTTGGACGATGACGAGATTGCAAATCGTCTAAATGCTGCAAGAAGCATCTCGATTGGTGTTGTTCATCATTTTCCATTTGCAGATTTGCGGGTTGCTACTGGTAATTTTGCATCAAGTCGCCTTATTGGGAAAGGATCCATTGGATGTGTTTACCGGGCAAAATATGCTGATGGACAGGTTTTAGCTGTGAAAAAACTTGACTCTACCAAATTCCTTGGCAGCTCTCCAGAGGAATTCTCTCAGATTATAACAAAAATTTCCCGTATTCACCACCCAAATATTGTTGAACTTGTTGGTTATTCTTCAGAGCAAGGAGACAACATGTTAGTATATGAGTATTTCCGAAATGGCTCTCTTCATAAATTTTTACATGTGTCAGACGACTTCAGCAAGCCACTAACATGGAACACTAGAGTCAAAATCGCACTAGGCACTGCTCAAGCAATCGCATACCTGCATGAGAGCTGTTCTCCACCTATAGTTCACAGGAACATCAAGTCTTCCAATATTGTGCTCGACAATGAATACAATCCTCATCTCTCAGACTGTGGCTTGGCATCCTTCCATCAGCGCCTTAGCCAAAATCTTGGGTCAGGATATAAAGCCCCTGACTGTTCAATACCTGAGGCTTATCCCTTGAAGAGTGATGTGTACAGCTTTGGGGTAGTCATGCTGGAGCTGTTAACAGGTCGAAAGCCTTTGGACAGGTCGAAGCCAATATCAGAACAATATCTTGTTCTTTGGGCCGCCCCTCAGCTTCATGACATTGTTTCATTGTCAAACATGGTGGATCCTTCCTTGCGAGGACTTTACCCTCCTAAATCACTCTCAATGCTTGCTGACATCATTGCTCTTTGTGTTCGGCGTGAGCCGGAATTTCGACCAGCAATTTCGGAAGTGGTTCTCTCACTGGTAAGACTAATTGAGCATTCAAATATGAACATGAGAGAGGATATGAATCTTGGGATGGATGATAGTGATGACTGGCATTTTAGGTGA	2043	0.4254	MRHNLAGLWISLLAIFTTAVHCRTDSQDVSALNGMYSSLTSHSQLEGWKSSGGDPCGDSWKGIKCSGSSVTKIDLSGLGLTGSMGYQLANMASVTHLDLSKNNLNGDLPYQLPPNSRYIDLSKNSFTGVVPFSISEMTNLNTLNLAHNQLNNQLGDMFGKLTKLKLMHLSFNSMSGNLPQSLKSLLSLKKLDLQNNQFSGSINVLANLPLEELNVENNKFSGWIPTKLKNISSLRTGGNSWSTGPAPPPPEKGIGKPAVIGIVIGSIAFVLLVVSVVAVVKKRSSPPTSRFLDEEHNHHRSPTPLASQELSKNVSEFNPSDSALIDIKALPEVPSSSARSSASDCVQTLDDDEIANRLNAARSISIGVVHHFPFADLRVATGNFASSRLIGKGSIGCVYRAKYADGQVLAVKKLDSTKFLGSSPEEFSQIITKISRIHHPNIVELVGYSSEQGDNMLVYEYFRNGSLHKFLHVSDDFSKPLTWNTRVKIALGTAQAIAYLHESCSPPIVHRNIKSSNIVLDNEYNPHLSDCGLASFHQRLSQNLGSGYKAPDCSIPEAYPLKSDVYSFGVVMLELLTGRKPLDRSKPISEQYLVLWAAPQLHDIVSLSNMVDPSLRGLYPPKSLSMLADIIALCVRREPEFRPAISEVVLSLVRLIEHSNMNMREDMNLGMDDSDDWHFR	680

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco07g0992	680	Pfam	Leucine rich repeat N-terminal domain	26	66	IPR013210	-
	Acco07g0992	680	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	73	652	-	-
	Acco07g0992	680	SUPERFAMILY	Protein kinase-like (PK-like)	365	652	IPR011009	-
	Acco07g0992	680	Gene3D	Transferase(Phosphotransferase) domain 1	462	676	-	-
	Acco07g0992	680	ProSiteProfiles	Leucine-rich repeat profile.	187	209	IPR001611	GO:0005515
	Acco07g0992	680	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 3	25	252	-	-
	Acco07g0992	680	Pfam	Leucine rich repeat	117	173	IPR001611	GO:0005515
	Acco07g0992	680	FunFam	Protein STRUBBELIG-RECEPTOR FAMILY 8	350	461	-	-
	Acco07g0992	680	MobiDBLite	consensus disorder prediction	286	312	-	-
	Acco07g0992	680	Gene3D	Phosphorylase Kinase; domain 1	347	461	-	-
	Acco07g0992	680	SUPERFAMILY	L domain-like	23	236	-	-
	Acco07g0992	680	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 8	462	666	-	-
	Acco07g0992	680	Gene3D	Ribonuclease Inhibitor	24	324	IPR032675	-
	Acco07g0992	680	MobiDBLite	consensus disorder prediction	287	302	-	-
	Acco07g0992	680	Pfam	Protein tyrosine and serine/threonine kinase	387	650	IPR001245	GO:0004672\|GO:0006468
	Acco07g0992	680	ProSiteProfiles	Protein kinase domain profile.	384	661	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco07g0992	Acco-ChrAcco07	13408932	13426244	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco07g0992	1	679	Strubbelig Receptor Gene Family	AT1G78980	53.505	0.0	735

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Acco07g0992		PK_Tyr_Ser-Thr	3e-36	CL0016