Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0982 ATGGGCGCGCACGCGGCTTTGCTTGTGCGCGTTCCGGCAGCAACAACATCTCGTCTTGTCCCTCTTTTGCTTCTTCTTCTTTTTCTCTTGTCGTCATCATCGCCTTCGCTGTCCTACTCCGACGCGGATGCCCTCTTAAAATTCAGAAGCTCCCTCATCAATGTCGTCAGTCTCAGCAGCTGGGATCCAGCCATTAACCCTAAGCCGCCATGCAATGGCAATATCGCCAACTGGGTCGGCATTTTCTGCATCAACGGCACCGTTTGGGGCTTCCGTCTCGAGAACATGGGCCTCATGGGAAACATTGACGTTGAAGCTCTTGCTTCCATGACCCGTTTAAGGTCTGTTAGCTTGATGAACAATTCCTTCGCCGGACCTCTGCCGGGGATCAAGATCATGAAGAATCTGAAGTCCCTTTATTTATCATACAACCATTTCTCGGGTGGCATACCCAACGACGCATTTGTGGGTATGAACCGGTTAAAGAAAGTTTATCTGGCCAATAACCAGTTGGACGGAGAAATCCCTTCCTCCCTCGGCGTCTTGCCTAGCCTCCTCGCCGTCCGGCTCGATGGCAACAAGTTTCACGGCCGAATCCCTAAGTTTCAAAATAGAACGTTGAAGCTTATTGATATGTCTGACAATGATTTGGAAGGCCCCATTCCTCAGAGTCTAGCCTCTTTCAGCGCCTTCGCTTTCTCAGGGAACGCACATTTATGTGGACGTCCTCTGGAGAATCCATGCACTTCAATCCCTTACGCGAATGTAGATTCTCCATCAAAGACATCGATTCTCAGGATTCTTCTCATTCTTGTTCTCACAATACTAATCGTAGTGGTGATCGTTTCGGCGATCGTGATAGCCCGCCTGAGAACTCGCCAGAGATACGCGGACGACGAATACCGGAGCCAACATTTAGTGAGGTACGCTCCCCCGGCAGCGTACTCGAAGCCGAAGACAACAGGCGATCGTGAGAATGCGAAGTTTCTTGCAGAACAAAACAACAATTATCAGAAAACGCCATCGATATCGAAGAAGAAAGCAGAGGTTGGGAAGTTGATATTCTTGAGGAATCGGGAGAAGAAGTTTGATTTGCACGATTTGATGAAGGCGTCGGCGGAGGTTCTAGGGAGTGCGGCATTTGGATCGTCGTATAAGACGATGTTGAAGGATGATCAAACGGTGGTGGTGAAGAGGTATAGGCAGATGAACAATGTGTCAAGAGATGAGTTTGTTGAACAAATGGCAAGGATTGGTGATTTGTCTCATCCAAATCTGCTTCCTCTCGTTGCTTATTATTATCGGAAAGAAGAGAAACTCTTGCTCACTGACTTCGTTCCCAGGGGTTGCTTGGCCAGTCAGCTTCATGGTAATCATAACAACGAGAGGCCTGGCTTAAGCTGGCCAACTCGTTTAAAAATTGTGAAAGGCGTAGCAAGGGGTTTGTCATATCTCTACACAGCATTACCAAGCCTAGTGGTGCCTCATGGTCATTTGAAATCTTCTAACATTTTGTTAGATGAAAATTATGAGCCTTTACTCACAGATTACGCCTTCATTCATGTCATCAATCTGGATCATGCTCAGCAGAGCATGATGCCGTACAAGTCGCCGGAGTACGCACAGCTCGGCCGGATCACAAAGAAGACCGACGTGTGGAGCTTAGGCATCGTGATCCTGGAGATCCTAACAGGGAAGTTCCCGGAGAACTATCTGACTCTGAGGCACGATATCGGTTCAGACATTGCGAGCTGGGTGAACGGTATGATAACAGATAAGCGAACGAGTGAAGTGTTTGATGTTGAAATGGGAGGAATCGAGAATGGTAAGAGTGAGTTGCTAAAGCTTTTGAAGATTGGACTGAGTTGTTGTGAGGAGAATGTGGAGAGACGATTTGATATAAAGGAAGCTCTTGAGCAAATCGAAGAGTTGAAGGATGAGAATGAAGGAGATTTTTCTTTGATTGTAACTAGCGAACGGGATGCTTTTCAAGCTATATGA 2001 0.4728 MGAHAALLVRVPAATTSRLVPLLLLLLFLLSSSSPSLSYSDADALLKFRSSLINVVSLSSWDPAINPKPPCNGNIANWVGIFCINGTVWGFRLENMGLMGNIDVEALASMTRLRSVSLMNNSFAGPLPGIKIMKNLKSLYLSYNHFSGGIPNDAFVGMNRLKKVYLANNQLDGEIPSSLGVLPSLLAVRLDGNKFHGRIPKFQNRTLKLIDMSDNDLEGPIPQSLASFSAFAFSGNAHLCGRPLENPCTSIPYANVDSPSKTSILRILLILVLTILIVVVIVSAIVIARLRTRQRYADDEYRSQHLVRYAPPAAYSKPKTTGDRENAKFLAEQNNNYQKTPSISKKKAEVGKLIFLRNREKKFDLHDLMKASAEVLGSAAFGSSYKTMLKDDQTVVVKRYRQMNNVSRDEFVEQMARIGDLSHPNLLPLVAYYYRKEEKLLLTDFVPRGCLASQLHGNHNNERPGLSWPTRLKIVKGVARGLSYLYTALPSLVVPHGHLKSSNILLDENYEPLLTDYAFIHVINLDHAQQSMMPYKSPEYAQLGRITKKTDVWSLGIVILEILTGKFPENYLTLRHDIGSDIASWVNGMITDKRTSEVFDVEMGGIENGKSELLKLLKIGLSCCEENVERRFDIKEALEQIEELKDENEGDFSLIVTSERDAFQAI 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0982 666 Pfam Leucine rich repeat N-terminal domain 40 83 IPR013210 -
Acco07g0982 666 SUPERFAMILY Protein kinase-like (PK-like) 374 646 IPR011009 -
Acco07g0982 666 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 649 IPR046959 -
Acco07g0982 666 Pfam Protein tyrosine and serine/threonine kinase 374 638 IPR001245 GO:0004672|GO:0006468
Acco07g0982 666 SUPERFAMILY L domain-like 68 240 - -
Acco07g0982 666 Gene3D Phosphorylase Kinase; domain 1 335 445 - -
Acco07g0982 666 Gene3D Ribonuclease Inhibitor 40 155 IPR032675 -
Acco07g0982 666 Gene3D Transferase(Phosphotransferase) domain 1 446 661 - -
Acco07g0982 666 Gene3D Ribonuclease Inhibitor 156 250 IPR032675 -
Acco07g0982 666 Coils Coil 627 647 - -
Acco07g0982 666 FunFam Pollen receptor-like kinase 1 446 653 - -
Acco07g0982 666 FunFam pollen receptor-like kinase 1 339 445 - -
Acco07g0982 666 Pfam Leucine rich repeat 135 195 IPR001611 GO:0005515
Acco07g0982 666 ProSiteProfiles Protein kinase domain profile. 370 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0982 Acco-ChrAcco07 12750876 12754011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0982 19 662 Receptor kinase-like Gene Family AT5G35390 48.265 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco07g0982 PK_Tyr_Ser-Thr 4.5e-26 CL0016