Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0941 ATGGATCCTACTTGCGGTTTGGTTGACAAGTTTCGCGACCTAGTTCTCAACCAAACTTGGGAGCAGCTTCTTTATTTGATTTACTATCATAGAAACATTGACCAACTCAACCGACAACTTATGGAACTCACCTTTGAAAGAAGCTCCATACAACATCGAATAGATGAGGCTAAAAACAATGTAGAACAAATTGAAGAGAAAGTTCTTCATTGGTTGGGTCTAGTAGATGAGCTATCAGAGCAAGTACAAAAGTTTCATGAAGAAGAGAGTCAAGCTAAAACAGAGTGTAGCATAACTTCATGTACCAACCCGTGGCTGCGCTATAAACTAAGCAAAAGAGCAAAGGCAATTAAAGAACAAGTTGCTAAAATTTATGCAAAGAGAAACTTTGATAGAATTTCATACTCTGTTCCTCTCCCATCAGTGGTAGAATTAACCGACATAGAAGGCAATGGAGGGATTGATTCAAGAGTTCCAATTATGAATCAAATTTTCGAGGAATTGAGGAACCCCAGTGTTAACATGATCGGATTGTGTGGGCTTGGTGGTGTCGGGAAGACCACTATGGCTAAAGAGGTAGCAAAGAATCAAAAGATATTTGAAAAGGTAATCATGGCAACTATTTCTCAAGAAATGAACATTGAGAAGATTCAAGGTCAAATTGCTGAGAAGCTAAGTTTGCAACTTAGTGAAAACCATAAAGACGTTAGAGCTGTTCGTCTATGTGAGAGGTTGAAGCAAGAGAAGAGTATGCTCCTGATATTGGATGATCTTTGGGAGGAACTTGACTTGGGCAAAGTTGGAATTCCCCTTTTTAGTGTTGAAGGTTGCAAAATCTTACTAACTTCAAGGGATAAAACATTACTGTCAGATCTCATGAAATGTCAAAAAGTTGTCGAAGTGGGTGTTTTGTCAGAGGATGAATCATTGGAGTTGTTCAAGAAAATTGTTGAACTTTCTACTGACTCAAGCAGTCCTGAGTTGATATCTATAGCCACTGATATTGTTCGAAAGTGTGGAGGCCTTCCACTAGCAATTGCTACAGCTGCCAGAGCATTAAGGAACAAGGATATTGATGAGTGGAAAGATGCTGTTGCACGGTTGAATAATCCTTTAAGGAGAAACAACACATTAACAAGAGACGTGGATACCATTTTGAAATGGAGCTTTGATTGTTTAAGCTCATCAGAGTACAAACAAATTTTCTTGCTCTCTGCCATGTTATCTCACGATCCCTCAATTGAAGACTTGCTCGTGTACTCTGTGGGGTTAGATATTCTTGATGGCATAGAAAATATGGAGGATGCTCGTGTTGGAGTCTCTACTATTGCAAGGAAGCTAAAATCATTAAACTTATTTCTTGATAGCATTTCTAGTCATCATGTTACAATACATGATGTCTTTCGAGATGTTGCATTACCAATTGCATCCAGTGAATTACATGCGTTCATACGTAGAAGGTTGAAAGAATGGCCAGACGAAAATATGCTACAAGGTTGTAAGGGAATTTGCTTACAAGAGAGTGACATTAGTGACCTTCCAAAAGAGTTGCATTGTCCAAGACTACAATTTTTTTTTCTCAACAACACAAAATGGAATTTGAATATACCCAACATGTTTTTTAAATCTTCAAAGGAGCTGAAAGTGTTGGCATTTACTAGGCTACCAATTGAATTAGCAGAGTTGACTTCTTTACAAATGTTGAATTTGTCTCACTGCTACTGTCTCAAAGTGGTTCCACAGAAACTCCTATCTAGCTTAAAGAAATTAGAGGTTTTGCATATGGAAAATAGCTTTCACCATTGGAAAGTTGAAGGATATGGTGAAGCTAATGAAAATTCGACTCCATTAATATGGGATGAGAAGCTCTCACACAACTCATTCAACAACTTGAAAGTATTGGTTGTGAAAAGTTGTAACTTTGTGAAATTGTTGCCCTGTCAAGTGCTGAAATCTTTAAACAATTTAGAAGAACTATACATAGATGACTGTGATATGTTGGAGATTGTGTTTGATTTTGAAGATTTGAATGATTATTATAAAGAGATGGAGTCATCATCTGTGGTTGTGCCGCTGAAAAAGCTAAAGATAAGGAATTTGCCAAATTTGAAGAACGTGTGGAGCGATCATTACCAAGGAAATGTCTCCTTCCCAATTCTAAGGAGCATAGACGTTTCTCAGTGTAAAAGCCTCACAAGTATATTTCCTGAGTCTATAGCCAAAGGCATGCTTTGTGATCTTGAAGAGCTTGGAATACGTTTTTGCAATGTAGATGTGATTGTTGCAAAGGATCAAGTTTCAGAATCTATTCCTGTTATATTTAGGTTTCCCAGGCTAACTTCCTTTTTGCTTTCAGGCCTTCCAAAGTTGAGGAACTTCTATCCGCAAAAATACACACTAGAATGGCCATATCTTCAATAG 2421 0.3767 MDPTCGLVDKFRDLVLNQTWEQLLYLIYYHRNIDQLNRQLMELTFERSSIQHRIDEAKNNVEQIEEKVLHWLGLVDELSEQVQKFHEEESQAKTECSITSCTNPWLRYKLSKRAKAIKEQVAKIYAKRNFDRISYSVPLPSVVELTDIEGNGGIDSRVPIMNQIFEELRNPSVNMIGLCGLGGVGKTTMAKEVAKNQKIFEKVIMATISQEMNIEKIQGQIAEKLSLQLSENHKDVRAVRLCERLKQEKSMLLILDDLWEELDLGKVGIPLFSVEGCKILLTSRDKTLLSDLMKCQKVVEVGVLSEDESLELFKKIVELSTDSSSPELISIATDIVRKCGGLPLAIATAARALRNKDIDEWKDAVARLNNPLRRNNTLTRDVDTILKWSFDCLSSSEYKQIFLLSAMLSHDPSIEDLLVYSVGLDILDGIENMEDARVGVSTIARKLKSLNLFLDSISSHHVTIHDVFRDVALPIASSELHAFIRRRLKEWPDENMLQGCKGICLQESDISDLPKELHCPRLQFFFLNNTKWNLNIPNMFFKSSKELKVLAFTRLPIELAELTSLQMLNLSHCYCLKVVPQKLLSSLKKLEVLHMENSFHHWKVEGYGEANENSTPLIWDEKLSHNSFNNLKVLVVKSCNFVKLLPCQVLKSLNNLEELYIDDCDMLEIVFDFEDLNDYYKEMESSSVVVPLKKLKIRNLPNLKNVWSDHYQGNVSFPILRSIDVSQCKSLTSIFPESIAKGMLCDLEELGIRFCNVDVIVAKDQVSESIPVIFRFPRLTSFLLSGLPKLRNFYPQKYTLEWPYLQ 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0941 806 SMART AAA_5 172 304 IPR003593 GO:0016887
Acco07g0941 806 FunFam Probable disease resistance protein At1g61300 143 297 - -
Acco07g0941 806 Pfam NB-ARC domain 161 391 IPR002182 GO:0043531
Acco07g0941 806 Coils Coil 75 95 - -
Acco07g0941 806 Gene3D - 303 394 IPR042197 -
Acco07g0941 806 Gene3D Ribonuclease Inhibitor 610 797 IPR032675 -
Acco07g0941 806 PRINTS Disease resistance protein signature 245 259 - -
Acco07g0941 806 PRINTS Disease resistance protein signature 339 353 - -
Acco07g0941 806 PRINTS Disease resistance protein signature 175 190 - -
Acco07g0941 806 PRINTS Disease resistance protein signature 560 576 - -
Acco07g0941 806 Gene3D - 146 301 IPR027417 -
Acco07g0941 806 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 805 - -
Acco07g0941 806 Gene3D Ribonuclease Inhibitor 477 609 IPR032675 -
Acco07g0941 806 Coils Coil 33 67 - -
Acco07g0941 806 SUPERFAMILY L domain-like 465 791 - -
Acco07g0941 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 403 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0941 Acco-ChrAcco07 12277663 12282541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0941 173 491 WRKY Transcription Factor Family AT5G45050 26.506 2.32e-08 56.2