Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0936 ATGGGCTTCCATCAACGACCAGGAACGATCTTGCAACAAGCACGAATCCTGACCTGGAGCTTCCGCAGGCATCGTCAAAAAATGGTTGAGGAGGTTAAGGCAGTTGTTCCAGAGTCTGTGTTGAAGAAGAGGAAGAGAGAAGCGGAATGGGCTTTGGCCAAGGCACAGGAGACTGAAGCTGCAAAAAAGAAGAGAGCTGAGAGCCGCTTGGTGATTGAGAAAAGAACTGAGCAGTATTACAAGGAGTATGCAGAGCAGGAAAAGGAGTTGATCAGATTGAAACGTGAGGCTAAGCTGAAAGGTGGATTTTATGTAGATCCAGAGGCTAAACTATTGTTTATTATTCGCATCCGTGGTATTAATGCCATGCACCCAAAGACAAGGACTATCTTGCAGCTCTTGCGTTTGAGGCAGATATTCAATGGCGTGTTTCTTAAAGTTAACAAGGCTACAATGAACATGCTTCACAGGGTTGAACCATATGTGACCTATGGGTATCCAAACTTGAAGAGTGTAAAAGAACTTATTTACAAGAGGGGTCGTGGGAAGATCAACAAACAGAGAATTCCTCTAACTGATAATTCCATCATTGAACAGGCCTTGGGCAAGTATGGAATTATATCCGCTGAAGATCTCATCCACGAGATCATAACAGTTGGTCCTCACTTTAAGGAGGCCAACAACTTCCTCTGGCCCTTTAAACTTAAGGCGCCTCTGGGTGGACTAAAGAAGAAGAGAAACCACTATGTTGAAGGTGGTGATGCTGGTAACCGGGAGAACTACATCAATGAGCTAATTAGGAGGATGAATTAA 813 0.4416 MGFHQRPGTILQQARILTWSFRRHRQKMVEEVKAVVPESVLKKRKREAEWALAKAQETEAAKKKRAESRLVIEKRTEQYYKEYAEQEKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRTILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVKELIYKRGRGKINKQRIPLTDNSIIEQALGKYGIISAEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0936 270 FunFam 60S ribosomal protein L7 168 230 - -
Acco07g0936 270 Pfam Ribosomal L30 N-terminal domain 36 107 IPR012988 -
Acco07g0936 270 PANTHER 60S RIBOSOMAL PROTEIN L7 34 270 IPR039699 -
Acco07g0936 270 Gene3D - 114 265 IPR036919 -
Acco07g0936 270 NCBIfam 60S ribosomal protein uL30 37 270 IPR005998 GO:0000463|GO:0003735|GO:0022625
Acco07g0936 270 FunFam 60S ribosomal protein L7 111 215 - -
Acco07g0936 270 Gene3D - 168 230 - -
Acco07g0936 270 Pfam Ribosomal protein L30p/L7e 112 162 IPR016082 -
Acco07g0936 270 CDD Ribosomal_L7_archeal_euk 111 270 IPR035808 -
Acco07g0936 270 ProSitePatterns Ribosomal protein L30 signature. 130 162 IPR018038 -
Acco07g0936 270 Coils Coil 76 100 - -
Acco07g0936 270 FunFam 60S ribosomal protein L7 216 270 - -
Acco07g0936 270 SUPERFAMILY Ribosomal protein L30p/L7e 111 270 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0936 Acco-ChrAcco07 12215451 12217584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0936 31 270 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 83.750 2.11e-146 408