Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0924 ATGTCAGTCCCAATGAAGCTCCCATTTTTTATCCTATGCTTGTCTGCTCCTTTCTATGTCACTTCTACCCTGAGTTTGGATGGGTTGACTCTATTATCACTCCTCAACCACTGGACTTCCATGCCTCCTTCCTTAAATTCAAGCTGGAAGTCCTCTGATTCTACCCCATGTTCATGGCGAGGGATACAATGCAACCTCTACAAAAACGTTATCTTCATAAACCTCACTGCATCTCAGATTTTTGGTCAGCTTGGCCCAGAAATTGGACAGTTGACTCACTTGCAGAAACTTTTGCTGGCCTCAAATGGTTTCTCAGGTACAATACCCCCAGAGTTAGGTAATTGTAGTATGCTTGATTATATTGATCTTTCTGAGAATCATTTGTCAGGAAATATACCTCCAGAAATTGGTAATTGCAAATCTTTGAAGTCGTTACTTTTCTATTCCAATCAACTAGAGGGAGCCATTCCGAATGAATTGGGAAGACTAAGAAAATTGGAGGACCTTGAATTGTATTTCAACCGTTTGACAGGTGAAATTCCACTTTCCATTTGGAAGATTCAGAGTCTCAAGCATGTCCTTCTTCATAACAATAGCCTTTCAGGGAAATTGCCTTCAGAGGTAACAGAGCTCAAGCATCTGAAAAATATCTCATTGTTTGACAACCAATTCTCTGGAACAATTCCTCAAAGCTTGGGAATCAATAGCAGTTTAGTGAAGCTGGACTTGATGAATAATAAGTTCAGTGGTTACATACCTCCAAATCTTTGTTTTGGAAAGCAACTACGCACGCTGAACTTAGGTGTGAATCAACTTCAAGGGGGCATACCTCAAGATTTGGGAAGATGTGCGACTCTTGCAAGGTTGGTTCTCAATGACAATAATCTTTCTGGGTCTATTCCTAAATTTGAAGGCAATAATAATCTCATGTACATGGACATTAGCAAGAACAACATCAGTGGATCAATTCCACCGAGTTTGGGAAACTGCTCAAATCTCATTGGTTTAATTTTGTCCGCAAATAACATTACAGGGCTTATACCCTCAGAGCTAGGAAACCTTGTGAACCTTCAGGTTTTGAATCTTGCTCACAATAATCTAGGTGGTGCTTTGCCACTGCAACTGTCAAACTGTATCAAAATGATGATATTTGATGTGGGATTCAATTTTCTTAATGGCTCATTCCCATCAAGCATGAGGAGCTGGACTTCGTTAGCCAGGTTAATTTTAAGAGAGAATCATTTTAGCGGGGTTGCTCCTTTGTTCTTCTTAGATACCCAACTTCTTGAGTTACAACTTGGTGGAAATATGTTTGGAGGAGAAATTTCCAGATCAATTATATCATTGATTCCCTTATATGAGTTGAATCTGAGTTCTAATAAATTAACAGGTGAGATCCCTCCTACATTTGCGGAGCTGTCAATGCTTCAAAGCCTGGATTTAAGTCTGAACAATTTTTCAGGAAACATTCAAGTTCTTGGCAGACTTATATCATTATCAAAAGTCAATATATCATACAACTCATTCTCTGGTCCTTTACCACAATGGAACACGCAACAGCTGGAATTATCTCCATCATCATTCTTGGGCAATCCTGGCCTTTGTGTCAATTGTTCAATTTTAGATCGCTTAAGTTGCATAAATTCTACACATTTGAAGTCATGTGACTTTACATCAATTGACCCCAAAGGCAGTTCAATTGACCACAAAGGCAGTAAACTACCAAAATCAGTAGTGTTAGCACTCGTAGTGTTTGTCAGTTGCCTGTCATTTGTAATTGTTTGCCTCCCATCTGTCATTTACATCAGCTGGTTTGCTCAAATATCTAACGTGGAGGTCAATGTTGATGATGTAGAGCAAGGGGCTTCGTTTTCAAATGATGAGGGTTATTTCAGAATTATTAACCTACTAGAAGCTACGGAACATCTACATGATAAATATATAATTGGTGAAGGAGGGCATGGAATTGTTTATAAAGCTGAACTTGATACTGGAGTTTTTGCTATTAAGAAGGTTAAATTTGCGAAAAGCAATAGGAGGAAATCAAACTTGATCAGAGAAATTGGAATGACTAGGAAGATTAGGCATAAAAATGTGGCAAGATGCCTAGGCTCCTGGATTAATGAGGAATATGGTCTAATTGTCAGCAGGTACATGGAAAATGGAAGCCTTCATGATCCCTCTACTACAATGCATTTGCGGTCAACATATCATCTAGGTACTCGAGGGTTTATGGCTCCAGAGATTGCATGTGTGGCAGTTCCAAGCTGCGAGCTTGACGTTTATAGTTATGGGGTAGTTTTGCTTGAGCTGATAACCAGAAAGAAAGTGTTAGATTCCTCATTTGTGGAAGAGGAAACCACGTTGGTAGGGTGGTTTAAAACTGTATGGAGGAGAACCAATGAACTTGAAGAGATTGTTGATCCGTCCATTGTGAGGGAGCTTTCAGATTTAAATGTAAAGGTGCAAATTATCAAAGTGCTTTTGGTGGCTCTAATATGTACTGAGACAGATCCAGGAAAAAGACTGAAAATGAGAGATGTCATCGAATTCTTTGAAACGCCGGCTGATCCAGGAATATTCAATCAGCTTGACAGAGCATTTCATTTAGGAAGTTTTCTTGCTACTGCTGGTGCCTCTATACTTTTTCAGTTTTCTGTGCACCTATTTCCAATCTCGAAGGAGGAAGTCAAGATCGCTGCAAGTAGAGGTTCTTTCCCAATTCTTCACGAGATGATGGAGCATAATGAAAGATTGAATAATCCAAATATTATTGGCAGAGGAACTCATGGTGTTGTTTATAAATTTTCAGTAGGGGCGTCCAAAGCTTATGCTGTAAAAAAGGTTGCCTTTGCAGGGAACAAAAGAAGGATTGCACGCATAGCCAGAGAAATTGAGATCATTGGAAATATTAGGCACCGAAATCTAGTCAGATTGCTAGACTTTTTGTTCGAAAAAGACCATTGTCTAATCTTGTACAATTACTTGCCAAATGGAAACCTTCATGATGTTTTGCATGAAAAGAATCCACTGCCATGCCTAGAGTGGAATGTCCGGTATAGGATAGCTGTTGGAATTGCGCATGGATTGACTTATCTCCATTATGATTGTCATCCTGCCATAGTTCACTGTGCCATCAAACCTAAAAATATACTTTTGGATTCTGATATGGATCCTTATATTGCTAATTTTGGTATTGCCAAGCTTTTGGATCAGTCTTCGTCAACAACATCTTCACCAGTTCCAGGCACACAAGGGTATATAACTCCAGGTACTTATTTTACAGATATTGTGAACCTTCTCTTTATTATTTCTGAATGCTTTTATAAAATTACATGTTACCATTTGGCAGATGATAAATATACAACAGCAAAGACCAGAGAGTTTGATGTCTACAGTTATGGGATGGTTTTGCTTCAGTTGATAACAAGAAAGAAGGCAGTAGATCCATCATTTATGAATGGAACTGAGATAGGAATTTGGGTTAGAACTCAATGGAGGGAAAGAGGAGACATTCATACAATTGTTGATTCAAGCCTTGCAGAGGAGGTTTCGAATTCAAATGTACTTGAACAAGTCACCATAGTGCTTTTGCTGGCTCTGAGTTGCACAGAGAAGAATCCACACATGAGACCCTCAATGAGAGATGTTATCAAGAAATTGAAAGATGCTAATCCAATGAAAGGAGGAAAAAGCTTCCAACTGGCTTGCAAATGTTTTGGCTACCATGTTGTAATTAACTCTTTCAATTCTGTAAAAGAAGCTGAAGTTGTCAATTTTCTTGCCATGCAACCTGATGGGCCTATGACTAGTCGGACAAGACTTTTCTGGTTACACCTACACAATGCCAGACTGTTGCGAGTTTTGATATTCACTTTAAGCTTGGGTTCCATCATAAGCAAATCTAGAATGCGAGTAGATGAAGGCAAACAGAGTGCATGGCCTCAAATTTTCTGGTATTACAGAATTCGTTTCCACTGTGCAGTTTAA 3990 0.3905 MSVPMKLPFFILCLSAPFYVTSTLSLDGLTLLSLLNHWTSMPPSLNSSWKSSDSTPCSWRGIQCNLYKNVIFINLTASQIFGQLGPEIGQLTHLQKLLLASNGFSGTIPPELGNCSMLDYIDLSENHLSGNIPPEIGNCKSLKSLLFYSNQLEGAIPNELGRLRKLEDLELYFNRLTGEIPLSIWKIQSLKHVLLHNNSLSGKLPSEVTELKHLKNISLFDNQFSGTIPQSLGINSSLVKLDLMNNKFSGYIPPNLCFGKQLRTLNLGVNQLQGGIPQDLGRCATLARLVLNDNNLSGSIPKFEGNNNLMYMDISKNNISGSIPPSLGNCSNLIGLILSANNITGLIPSELGNLVNLQVLNLAHNNLGGALPLQLSNCIKMMIFDVGFNFLNGSFPSSMRSWTSLARLILRENHFSGVAPLFFLDTQLLELQLGGNMFGGEISRSIISLIPLYELNLSSNKLTGEIPPTFAELSMLQSLDLSLNNFSGNIQVLGRLISLSKVNISYNSFSGPLPQWNTQQLELSPSSFLGNPGLCVNCSILDRLSCINSTHLKSCDFTSIDPKGSSIDHKGSKLPKSVVLALVVFVSCLSFVIVCLPSVIYISWFAQISNVEVNVDDVEQGASFSNDEGYFRIINLLEATEHLHDKYIIGEGGHGIVYKAELDTGVFAIKKVKFAKSNRRKSNLIREIGMTRKIRHKNVARCLGSWINEEYGLIVSRYMENGSLHDPSTTMHLRSTYHLGTRGFMAPEIACVAVPSCELDVYSYGVVLLELITRKKVLDSSFVEEETTLVGWFKTVWRRTNELEEIVDPSIVRELSDLNVKVQIIKVLLVALICTETDPGKRLKMRDVIEFFETPADPGIFNQLDRAFHLGSFLATAGASILFQFSVHLFPISKEEVKIAASRGSFPILHEMMEHNERLNNPNIIGRGTHGVVYKFSVGASKAYAVKKVAFAGNKRRIARIAREIEIIGNIRHRNLVRLLDFLFEKDHCLILYNYLPNGNLHDVLHEKNPLPCLEWNVRYRIAVGIAHGLTYLHYDCHPAIVHCAIKPKNILLDSDMDPYIANFGIAKLLDQSSSTTSSPVPGTQGYITPGTYFTDIVNLLFIISECFYKITCYHLADDKYTTAKTREFDVYSYGMVLLQLITRKKAVDPSFMNGTEIGIWVRTQWRERGDIHTIVDSSLAEEVSNSNVLEQVTIVLLLALSCTEKNPHMRPSMRDVIKKLKDANPMKGGKSFQLACKCFGYHVVINSFNSVKEAEVVNFLAMQPDGPMTSRTRLFWLHLHNARLLRVLIFTLSLGSIISKSRMRVDEGKQSAWPQIFWYYRIRFHCAV 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0924 1329 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 735 852 - -
Acco07g0924 1329 ProSitePatterns Protein kinases ATP-binding region signature. 925 948 IPR017441 GO:0005524
Acco07g0924 1329 Gene3D Phosphorylase Kinase; domain 1 893 995 - -
Acco07g0924 1329 Gene3D Ribonuclease Inhibitor 186 307 IPR032675 -
Acco07g0924 1329 FunFam Os07g0541700 protein 996 1084 - -
Acco07g0924 1329 ProSiteProfiles Protein kinase domain profile. 428 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0924 1329 SUPERFAMILY RNI-like 205 538 - -
Acco07g0924 1329 SUPERFAMILY L domain-like 27 306 - -
Acco07g0924 1329 FunFam Leucine-rich repeat receptor-like protein kinase TDR 236 546 - -
Acco07g0924 1329 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Acco07g0924 1329 FunFam Leucine-rich repeat receptor-like kinase 29 132 - -
Acco07g0924 1329 Gene3D Phosphorylase Kinase; domain 1 606 715 - -
Acco07g0924 1329 Gene3D Transferase(Phosphotransferase) domain 1 996 1234 - -
Acco07g0924 1329 Gene3D Transferase(Phosphotransferase) domain 1 716 858 - -
Acco07g0924 1329 SUPERFAMILY Protein kinase-like (PK-like) 630 851 IPR011009 -
Acco07g0924 1329 Pfam Leucine rich repeat 308 367 IPR001611 GO:0005515
Acco07g0924 1329 ProSitePatterns Protein kinases ATP-binding region signature. 649 671 IPR017441 GO:0005524
Acco07g0924 1329 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
Acco07g0924 1329 Gene3D Ribonuclease Inhibitor 308 555 IPR032675 -
Acco07g0924 1329 Pfam Protein kinase domain 644 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0924 1329 Pfam Protein kinase domain 923 1219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0924 1329 FunFam MDIS1-interacting receptor like kinase 2 isoform A 133 232 - -
Acco07g0924 1329 SUPERFAMILY Protein kinase-like (PK-like) 906 1221 IPR011009 -
Acco07g0924 1329 ProSiteProfiles Protein kinase domain profile. 919 1228 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0924 Acco-ChrAcco07 12054732 12060179 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0924 740 850 Receptor kinase-like Gene Family AT1G17750 46.087 2.75e-20 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco07g0924 Pkinase 1.7e-32 CL0016