Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0913 ATGAGGCCAGGTCAGTCGCCCCCGGGTCCCGGAGCTCCGAATCGTGACCGTAAGAGTTTTGGCCGTAAACAACTGACCTTGCCGTTGCCGCCGCGTGACCCTTCAAGACCGGTGCCTCTTCCTCTTCCACCGTCCAACTCGGGGGTGCCCTCGACGAGTCTCCATGCCGGTCCGGTTCACCAGCTCATCCCCTTCACGGAGCTCGAACGCCTCAACCGAATCGGTAGCGGTGCCGGTGGGACTGTCTACAAGGTCGTCCACCGACCCACCGGTCGGGCTTTTGCGCTGAAGGTTATTTACGGCCATCACGAGGACGCCGTGCGCCGACAGATCCTTCGCGAAGTCCAGATCCTTCGGGACGTGGATGACGAGAACGTGGTCAAGTGTTACGATATGTATGATCACAACGCTGAAATCCAAGTTCTTCTCGAGTTCATGGACGGTGGGTCCTTGGAAGGCCAACACATCCCCGACGAGCAGCGCCTCGCAGATCTGGCTTGTCAGATTCTTCGTGGCCTCGCCTACCTTCATCGCCGCCACATCGTTCACAGAGACATCAAGCCATCGAATCTGCTGATCAACTCGCGTAACCAAGTCAAGATTGCAGACTTCGGTGTGGGTCGGATTCTTGCGCAAACCATGGATCCGTGTAAGTCATCGGTGGGGACGATCGCTTATATGAGCCCCGAGAGAATCAATACAGACATCAACGACGGACAATACGATGCGTATGCCGGCGATATATGGAGCCTTGGAGTGAGTATCCTGGAATTTTATATGGGTAGATTTCCCCTTGCGGTGGGAAGGCAAGGGGATTGGGCCAGTTTGATGTGTGCGATTTGTATGTCTCAGCCTCCGGAGGCACCGGCTACGGCGTCGCGTGAGTTTAGGGATTTCATATCGCGATGTTTGCAGAGAGATCCGTCGCGGAGGTGGACGGCGTCGAGATTGTTAGGGCATCCTTTTATAAATCCGGGAATTCGACAACAGAATCCAGTTCATCAGAATCTTCATCAGCTGCTACCTCCTCCTCGCCCGCTTTCTTCCTAG 1050 0.5552 MRPGQSPPGPGAPNRDRKSFGRKQLTLPLPPRDPSRPVPLPLPPSNSGVPSTSLHAGPVHQLIPFTELERLNRIGSGAGGTVYKVVHRPTGRAFALKVIYGHHEDAVRRQILREVQILRDVDDENVVKCYDMYDHNAEIQVLLEFMDGGSLEGQHIPDEQRLADLACQILRGLAYLHRRHIVHRDIKPSNLLINSRNQVKIADFGVGRILAQTMDPCKSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPLAVGRQGDWASLMCAICMSQPPEAPATASREFRDFISRCLQRDPSRRWTASRLLGHPFINPGIRQQNPVHQNLHQLLPPPRPLSS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0913 349 SMART serkin_6 68 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0913 349 Gene3D Phosphorylase Kinase; domain 1 52 147 - -
Acco07g0913 349 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 61 325 - -
Acco07g0913 349 ProSiteProfiles Protein kinase domain profile. 68 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0913 349 SUPERFAMILY Protein kinase-like (PK-like) 67 343 IPR011009 -
Acco07g0913 349 CDD PKc_MAPKK_plant_like 67 324 - -
Acco07g0913 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Acco07g0913 349 FunFam Mitogen-activated protein kinase 2 148 335 - -
Acco07g0913 349 MobiDBLite consensus disorder prediction 30 46 - -
Acco07g0913 349 Gene3D Transferase(Phosphotransferase) domain 1 149 339 - -
Acco07g0913 349 Pfam Protein kinase domain 69 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0913 349 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Acco07g0913 349 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0913 Acco-ChrAcco07 11894018 11895067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0913 1 349 MAP Kinase Kinase Gene Family AT3G21220 69.638 1.65e-164 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Acco07g0913 Pkinase 9.2e-64 CL0016