Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0903 ATGGCTCAAGACCCTGTCTCTGATCTTCTCGTCGAGCTGTTCTTTTTTTCTTCTTTCTTCTTCTGTTTTGTGGCCACCGAACTTCTCTGCATAGAATACCCATTTTTCTCTGCTCTGTTTTTCCAACAACATGAAGATCATCCATATGTCCCATTCACTTACCCTGAATTTCCTCAACCATTGAAATTGCTCAAGTTCATCCAACCCTCCTTCATCACTGCTCAACACAAAAACAATTCATCATCATCATCATCATCTTCTTCATCTTCATCTTCTTCCTCCTCCTCCTCCTCCCCCTATGCTTCCGCTTCATCATCATCTTCTTCTCACCCAGAAAATAAGCATGTGAAGTCTTCAATTAAAGTTGAGGAACCCTCGCAAGTGATCTGTGAAATCTGCGCAGAAACTAAACGGATTACCCAGATGATCAAGAACAAGACATGCGACCATTCGTATTGCTCCGATTGTATGACAAAACATGTGGTCACGAAAATCCAAGACAGTATAACAGCAGTTCCATGTCCTGGTTTGGATTGTGAAAGTGTTTTTGAGCTGGAAGCTTGTCAGCCATGGCTTCCCAGGGACTTAATTGAAAGGTGGGATAAGGCTCTGTGTGAAGCTCTGTTTCTGACAGTGCCTAAATTTTACTGTCCCTTTAAGGATTGTTCAGCCATGATGCTGGTTGAGAATGAGGAAGATCAAGGTGCAAGGGAAACAGAGTGTCTTGTTTGCCATAGAATGTTCTGTGCAAGGTGTAATGTTCCATGGCATCCTGGAGTTGACTGTGAGGAATACCAGAAACTAAACGAGAATGAGAGAGAGAGGGAAGATTTGCTTGTGAGGCAGCTCGCTAAAGAGAAGAAATGGGGAAGGTGTCCGAAGTGTAAGTTTTATGTGGAGAAGATAATTGGATGCCTGCACATTACTTGCAGGTCAGCTTTCTGCTACAAATTTATATGGTGCTTTTAA 969 0.4262 MAQDPVSDLLVELFFFSSFFFCFVATELLCIEYPFFSALFFQQHEDHPYVPFTYPEFPQPLKLLKFIQPSFITAQHKNNSSSSSSSSSSSSSSSSSSSPYASASSSSSSHPENKHVKSSIKVEEPSQVICEICAETKRITQMIKNKTCDHSYCSDCMTKHVVTKIQDSITAVPCPGLDCESVFELEACQPWLPRDLIERWDKALCEALFLTVPKFYCPFKDCSAMMLVENEEDQGARETECLVCHRMFCARCNVPWHPGVDCEEYQKLNENEREREDLLVRQLAKEKKWGRCPKCKFYVEKIIGCLHITCRSAFCYKFIWCF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0903 322 MobiDBLite consensus disorder prediction 77 96 - -
Acco07g0903 322 MobiDBLite consensus disorder prediction 101 120 - -
Acco07g0903 322 SUPERFAMILY RING/U-box 273 317 - -
Acco07g0903 322 ProSitePatterns Zinc finger RING-type signature. 148 157 IPR017907 -
Acco07g0903 322 ProSiteProfiles TRIAD supradomain profile. 126 322 IPR044066 -
Acco07g0903 322 Pfam IBR domain, a half RING-finger domain 214 262 IPR002867 GO:0008270
Acco07g0903 322 SUPERFAMILY RING/U-box 201 267 - -
Acco07g0903 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 208 IPR013083 -
Acco07g0903 322 SMART ibrneu5 198 262 IPR002867 GO:0008270
Acco07g0903 322 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 82 320 IPR031127 GO:0004842|GO:0016567
Acco07g0903 322 FunFam RBR-type E3 ubiquitin transferase 125 211 - -
Acco07g0903 322 SUPERFAMILY RING/U-box 125 207 - -
Acco07g0903 322 ProSiteProfiles Zinc finger RING-type profile. 130 175 IPR001841 -
Acco07g0903 322 Gene3D - 259 322 - -
Acco07g0903 322 Pfam Zinc finger, C3HC4 type (RING finger) 130 175 IPR018957 GO:0046872
Acco07g0903 322 CDD BRcat_RBR_unk 213 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0903 Acco-ChrAcco07 11757601 11758569 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0903 146 316 C3H Transcription Factor Family AT2G19610 28.022 7.35e-14 70.1