Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco07g0896 | ATGGCTCAAAATTCCTCCTCTGATCTTCTCTGTTCTGATGATCCTTTCCTCTCTGCTCTGTTTCACGCTGATGATGATGATAATTTTTGTGCCCCATTTACCGATGATGAATGTGCCAAACGCTTGCAGTTTCAGGAAACCCTCTATTCCTCCATCACTTCAAAAAATCCCAAAAATGATCCTCAGTCATCATCATCATCATCGTCACCGCCATCATCGTCATCTTCTTCTTCCTTGCACCTTTTACCTTCATCTTCATCATCTTCCCCGGCTTTAAAAATTGCTGACATTTGCCCTACCCCGGAAACTGAGCACCTGGAATACTCAGATGAAACGGATGAATCCTGGCAAGTCATTTGTGAAATCTGTGCTGAAACTAAAGAGGCTTCCCAGATGTTCCAAAATCAGAGATGCCACCACTCGTTTTGTTCTGATTGTGTCACAAAACATGTGGCAACAAAAATTCAGGAGAACATTACAGAAGTTTCTTGCCCTGATTTGGATTGTAAGAATGTTGTTGGGCTTGATGCTTGTCGGCCATGGCTTCCCAAGGACTTGCTTGATAGGTGGGATCAAGCTCTGTGTGAAGCTATGTTTCTGGCAACCCCTAAATTTTACTGCCCCTTTAAGGATTGTTCTGCCATGTCGCTGATGGAGAATGAAGAAGATATAATGGAAGCAGAGTGCCCTTATTGCCATAGATTGTTCTGTGCAAGGTGTGAGGTGCCATGGCATCCTGGGATTGAATGTGAGGAATTTCAGAGACTAAATGAAAATGAAAAAGAGAGGCAAGATTTGATTGTGAGAGAGCTTGCTAAAGAGAAGAAGTGGAGAAGGTGTCCCAATTGTAAGTTCTATGTGGAGAAGGACGGAGGATGCTTGCACATCACTTGCAGGTGCAAATATGAGTTTTGCTATGGGTGTGGAGAACAGTGGACTTCTACTCATGGAGGCTGCCAAACAAATTAA | 969 | 0.4334 | MAQNSSSDLLCSDDPFLSALFHADDDDNFCAPFTDDECAKRLQFQETLYSSITSKNPKNDPQSSSSSSSPPSSSSSSSLHLLPSSSSSSPALKIADICPTPETEHLEYSDETDESWQVICEICAETKEASQMFQNQRCHHSFCSDCVTKHVATKIQENITEVSCPDLDCKNVVGLDACRPWLPKDLLDRWDQALCEAMFLATPKFYCPFKDCSAMSLMENEEDIMEAECPYCHRLFCARCEVPWHPGIECEEFQRLNENEKERQDLIVRELAKEKKWRRCPNCKFYVEKDGGCLHITCRCKYEFCYGCGEQWTSTHGGCQTN | 322 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco07g0896 | 322 | ProSiteProfiles | TRIAD supradomain profile. | 116 | 322 | IPR044066 | - | |
Acco07g0896 | 322 | Pfam | Zinc finger, C3HC4 type (RING finger) | 120 | 165 | IPR018957 | GO:0046872 | |
Acco07g0896 | 322 | ProSiteProfiles | Zinc finger RING-type profile. | 120 | 165 | IPR001841 | - | |
Acco07g0896 | 322 | FunFam | RBR-type E3 ubiquitin transferase | 252 | 322 | - | - | |
Acco07g0896 | 322 | SMART | ibrneu5 | 260 | 319 | IPR002867 | GO:0008270 | |
Acco07g0896 | 322 | SMART | ibrneu5 | 188 | 250 | IPR002867 | GO:0008270 | |
Acco07g0896 | 322 | PANTHER | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 53 | 312 | IPR031127 | GO:0004842|GO:0016567 | |
Acco07g0896 | 322 | ProSitePatterns | Zinc finger RING-type signature. | 138 | 147 | IPR017907 | - | |
Acco07g0896 | 322 | SUPERFAMILY | RING/U-box | 117 | 197 | - | - | |
Acco07g0896 | 322 | Pfam | IBR domain, a half RING-finger domain | 269 | 319 | IPR002867 | GO:0008270 | |
Acco07g0896 | 322 | Pfam | IBR domain, a half RING-finger domain | 194 | 250 | IPR002867 | GO:0008270 | |
Acco07g0896 | 322 | MobiDBLite | consensus disorder prediction | 50 | 93 | - | - | |
Acco07g0896 | 322 | Gene3D | - | 248 | 322 | - | - | |
Acco07g0896 | 322 | SUPERFAMILY | RING/U-box | 261 | 320 | - | - | |
Acco07g0896 | 322 | SUPERFAMILY | RING/U-box | 194 | 255 | - | - | |
Acco07g0896 | 322 | CDD | Rcat_RBR_unk | 276 | 312 | - | - | |
Acco07g0896 | 322 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 114 | 199 | IPR013083 | - | |
Acco07g0896 | 322 | FunFam | RBR-type E3 ubiquitin transferase | 115 | 201 | - | - | |
Acco07g0896 | 322 | CDD | BRcat_RBR_unk | 201 | 253 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco07g0896 | Acco-ChrAcco07 | 11638235 | 11639643 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco07g0896 | 120 | 309 | C3H Transcription Factor Family | AT2G19610 | 30.000 | 5.24e-22 | 94.0 |