Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0888 ATGAAGAAGAAGCATCCAGTTGTGGAGGTGGAGAAGAAGAAGTATCCGATTGGTCCTGAGCATTATGAACTCTACGAGGAAATTGGACAAGGCGTGAGTGCCACAGTTCATCGTGCTCTTTGTAAACCGTTCAATGAGACTGTTGCCATCAAAATTCTTGATTTCGAACGCGACAATGCTGATTTGAATAACATTTTTCGTGAAGCACACACAATGAACCTAATTGACCACCCTAATGTCCTTAAATCACACTGCTCATTCGTTAGTGAGCATAATCTGTGGTTTGTCATGCCATATATGGCTGGTGGTTCCTGCCTTCACATCTTAAAAGCTGCTTACCCTGATGGTTTTGAGGAGGTTGTAATAGCCACAATATTGCGAGAGGTATTAAAGGGTTTAGAATATCTTCATCAGCAAGGGCATATACATCGAGATGTTAAAGCTGGGAACATTCTAATTGATGGCCATGGGGCAATCAAGCTTGGAGATTTTGGTGTATCTGCTTGTCTTTTTGATTCTGGTGACCGGCAGCGCTCACGGAATACATTTGTTGGGACACCCTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGCTATGACTTCAAGGCTGATATCTGGTCATTTGGCATAACAGCATTAGAACTTGCCCATGGTCATGCCCCTTTCTCAAAGTATCCACCAATGAAGGTACTGTTAATGACTTTGCAAAGTGCGCCTCCTGGCCTTGATTACGAAAGGGATAGAAAGTTCTCTCTGTCATTTAAACAGATGATCTATGACTGTTTAAAGAAAGATCCTTCAAAACGACCAACTGCGAAAAAGTTGTTGAAGCATTCATTCTTTAAGCAGGCTCGTTCAAATGATTATATTTCACGAAAGCTTTTGGAGGGGCTACCTCCTTTAGGTGATCGCATTAAAGCCCTAAAGATAAATGAACAAGACATGCTTGCTCAAGAGAAAATGCCTCACGGGCGAATGGAAGAAATATCTCAGAATGAATACAAGCGAGGAATTAGTAGCTGGAACTTCAATCTTGATGATTTGAAGGCCCAGGCTTCCTTGGATTCTGATGACCCTATAGACGATAGCATAGGATGTTCAAACTCCTTTCCTACAATAGATGAACATGACAAGCTCTCATCAAGTCAAAACCAAAACCCATCTCAAGTTGCAGATATGGACAACAACGATGAGATGCAAAATAAATCAACTTCTGTCCCCAGAGTTGGCTCCAAGTTAAAATGTGAAGATCATGATTCTAGCCTCACCAGCTCAAGCCCTAGGCAGGACATTTCACAAGACTCTTCATCGCTTCTCGATAATCAGGTTGACATGGATGAAAAATCTGGTAGGGAGAATAGCGGGAGGCCTGTAGAGGGCACAGCTATTCATTCCCATCATGGCAGATTTTCAGTGTGTGTCTCCCACGAAGTTACCCCTCCATCTAGTCCGGGAGAAAGGGAGAAGCTGCAACATCAGCCCCAGAACAACTTAAATTTTAATGCAACTACAGTTCCCCTATCGAGGGATGATGAGCTTTCAGAACTTTCTTCTAAAGCTTCAAAACTGTCAGCTAGTTTTGATGATAATGACGAAAAAGCAAAGGTACCTGTTGTTCAGCAGAAAGGAAGGTTTAAGGTTACAGCTGAAAATGTTGACTTAGAAAAGGTGGGGCCATCGTCTCCTGTACTTCACAAGGATCAGCCATGA 1716 0.4289 MKKKHPVVEVEKKKYPIGPEHYELYEEIGQGVSATVHRALCKPFNETVAIKILDFERDNADLNNIFREAHTMNLIDHPNVLKSHCSFVSEHNLWFVMPYMAGGSCLHILKAAYPDGFEEVVIATILREVLKGLEYLHQQGHIHRDVKAGNILIDGHGAIKLGDFGVSACLFDSGDRQRSRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQSAPPGLDYERDRKFSLSFKQMIYDCLKKDPSKRPTAKKLLKHSFFKQARSNDYISRKLLEGLPPLGDRIKALKINEQDMLAQEKMPHGRMEEISQNEYKRGISSWNFNLDDLKAQASLDSDDPIDDSIGCSNSFPTIDEHDKLSSSQNQNPSQVADMDNNDEMQNKSTSVPRVGSKLKCEDHDSSLTSSSPRQDISQDSSSLLDNQVDMDEKSGRENSGRPVEGTAIHSHHGRFSVCVSHEVTPPSSPGEREKLQHQPQNNLNFNATTVPLSRDDELSELSSKASKLSASFDDNDEKAKVPVVQQKGRFKVTAENVDLEKVGPSSPVLHKDQP 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0888 571 MobiDBLite consensus disorder prediction 552 571 - -
Acco07g0888 571 Gene3D Transferase(Phosphotransferase) domain 1 103 334 - -
Acco07g0888 571 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 562 IPR047173 GO:0043539
Acco07g0888 571 MobiDBLite consensus disorder prediction 364 410 - -
Acco07g0888 571 FunFam Serine/threonine-protein kinase BLUS1 11 99 - -
Acco07g0888 571 MobiDBLite consensus disorder prediction 477 537 - -
Acco07g0888 571 ProSiteProfiles Protein kinase domain profile. 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0888 571 MobiDBLite consensus disorder prediction 356 464 - -
Acco07g0888 571 FunFam serine/threonine-protein kinase BLUS1 isoform X1 103 336 - -
Acco07g0888 571 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Acco07g0888 571 SUPERFAMILY Protein kinase-like (PK-like) 20 323 IPR011009 -
Acco07g0888 571 MobiDBLite consensus disorder prediction 488 513 - -
Acco07g0888 571 Pfam Protein kinase domain 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0888 571 Gene3D Phosphorylase Kinase; domain 1 10 98 - -
Acco07g0888 571 SMART serkin_6 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0888 571 CDD STKc_OSR1_SPAK 20 283 - -
Acco07g0888 571 MobiDBLite consensus disorder prediction 426 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0888 Acco-ChrAcco07 11522497 11526918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0888 10 568 MAP Kinase Kinase Kinase Kinase AT1G79640 64.249 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Acco07g0888 Pkinase 3.1e-61 CL0016