Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0862 ATGTTCAACTCCTGCTACACTAATCCATATGACCAGAGGGATAAATTTGTGAGGTTGGATTCTAACAGTTCTGTGCCATCCAACCCAAGTGGAGGATTCATGAAGAAGCTCAGATTTAATATAGAAGGTAAGCCGCGCGAAAAGAAGAATGCATCAAAATCCTTTAGGATGGGAATGAAGAGAGGATCAGATGGATTAAAGACATTTGGAAGATCACTGAAAAGTGGAGTCACCTGGCAAGTGTTCCCAGAAGATCTTAGAGTGTCAGAGACTAAAATTTTTGATCCTCAAGACAAGACCCTTTTGCTGTGGAACAAGTTTTTTGAGCTTTTGTGTATTATTTCAGTTTCATGTGATCCTCTCTTCTTCTATCTTCCTTACTTTAACCTCAGATCTCACTGCCTTGCCATTGATACTGCACTTGCTTCTACTGCTATCATCCTGAGAACTATACTTGATGTTATCTATCTCATCCGCATTGGTTTCCAATTCCGGACTGCTTATATTGCACCGTCCTCTCGGGTTTTCGGGCGAGGCGAACTTGTCATTGATCCAAAAAAGATTGCTAAGAGATACCTCGGGCGTTACTTCATTATCGATTTCACTTCTGTGCTGCCATTGCCACAGCTTGTGGTGGCTGATTATCTTCGCAAAGCAAAAGGTTTAGAGGTATTAGCCACAAAAACTACGCTATTGAGAGTGGTCATCCTTCAATATATTCCGAGATTTGCGCGCTTCATCCCTTTAGCTACCGAAGTTAAGAAGACAGCTGCTGTTTTTTCTGATAATGCACTCGTGGGGGCCACCTACTATTTGGTCTGGTACATGCTTGTTAGCCATATAGTAGGGTCTGCGTGGTACTTACTGGCTATTGAAAGGAATGACACGTGCTGGCAGCAGGCTTGTGCTGCTGCTGCTTCTCAAGGGTGTATTAAACATTTCTTGTACTGTGAGAGTTCGAATAGGCGCCATCCTGGATACGAAGCCTGGAGAAATGTCAATGGGGATATTCTTGACAGAAATTGTGGAGCTGGAGGTAGTGACCCACCATTTGATTATGGGATCTACACTAGAGTTATAGAGATGGGTATTACAGCCTCTAGTGATATGTGGAGTAAATTCTTTTTATGTTTCTGGTGGGGCCTTCAAAACGTCAGCACACTTGGGCAGGGGCTTGACACCAGTACTTACATTGGGGAGGCTTGTTTTTCCATTTTTATATGTATTTTGGGGCTTGTTCTTATGGCTCTTCTCATTGGAAAAGTGCAGAACTACCTTCAATCAATTACTGTTCGTCTTGAGGAAATGAGGATCAAGAGGCGTGATTCTGAGCAGTGGATGCATCACCGTGTGCTTCCTCCAGAGCTAAGGGAAAGAGTGAGACGCTATGATCAATACAAGTGGATGGAAACTCGAGGAGTCGACGAAGAGTCCTTAGTGCAGAGTCTTCCAAAAGATCTAAGGAGAGATATCAAACGACATCTTTGCTTGAATTTGGTTAGAAGGGTTCCTCTCTTTGCTAATATGGACGAGCGCTTGCTGGATGCTATCTGTGAGCGTTTGAAGCCTAGTTTGTACACAGATGGAACATACATTGTGAGGGAAGGAGATCCAGTAGTTGAGATGTTCTTCATCATACGCGGTCGTTTAGAGAGTGTGACCACAGATGGAGGAAGAAGTGGATTCTTCAACAGAGGTCTTCTCAAAGAAGGTGATTTCTGTGGAGAAGAGCTTCTAACATGGGCATTAGACCCTAAATCAGCAGCAAACTTACCATCATCCACAAGGACAGTGAAAGCCATCAATGAAGTTGAGGCGTTTGCTTTAGAAGCAGAGATGTTGAAATATGTGGCTTCACAGTTCAGGCGCCTCCATAGCAGACAGGTTCAGCAGACCTTCCGGTTTTACTCGCAGCAATGGAGAACATGGGCAGCAACTTTCATTCAGGCAGCGTGGAGAAGATATGCCAAAAGGAAGATGATGGAGTCGATGATGACAGAGGAAGAGGAGGAGATGGGGGAATTAGAAGAAGAAGATTATGGTTCTGATGATGATGGAAAAGCCTTGATCTCAAGAACTGAAAGTTCATCATCCACGACTGGTCTTGGTTCAGCCCTTTATGCTTCTCGCTTCGCTGCTAAGGCACTTCATAGTCGTAGGATTCGTTCTCTTAAAAAGCCTCCAGAACCTGACTTTAGTGTTTATGATCATAGCGATTGA 2220 0.4378 MFNSCYTNPYDQRDKFVRLDSNSSVPSNPSGGFMKKLRFNIEGKPREKKNASKSFRMGMKRGSDGLKTFGRSLKSGVTWQVFPEDLRVSETKIFDPQDKTLLLWNKFFELLCIISVSCDPLFFYLPYFNLRSHCLAIDTALASTAIILRTILDVIYLIRIGFQFRTAYIAPSSRVFGRGELVIDPKKIAKRYLGRYFIIDFTSVLPLPQLVVADYLRKAKGLEVLATKTTLLRVVILQYIPRFARFIPLATEVKKTAAVFSDNALVGATYYLVWYMLVSHIVGSAWYLLAIERNDTCWQQACAAAASQGCIKHFLYCESSNRRHPGYEAWRNVNGDILDRNCGAGGSDPPFDYGIYTRVIEMGITASSDMWSKFFLCFWWGLQNVSTLGQGLDTSTYIGEACFSIFICILGLVLMALLIGKVQNYLQSITVRLEEMRIKRRDSEQWMHHRVLPPELRERVRRYDQYKWMETRGVDEESLVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTDGTYIVREGDPVVEMFFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKSAANLPSSTRTVKAINEVEAFALEAEMLKYVASQFRRLHSRQVQQTFRFYSQQWRTWAATFIQAAWRRYAKRKMMESMMTEEEEEMGELEEEDYGSDDDGKALISRTESSSSTTGLGSALYASRFAAKALHSRRIRSLKKPPEPDFSVYDHSD 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0862 739 MobiDBLite consensus disorder prediction 722 739 - -
Acco07g0862 739 FunFam Cyclic nucleotide-gated ion channel 1 503 621 - -
Acco07g0862 739 Gene3D - 110 431 - -
Acco07g0862 739 Pfam Cyclic nucleotide-binding domain 526 615 IPR000595 -
Acco07g0862 739 ProSiteProfiles IQ motif profile. 641 670 IPR000048 GO:0005515
Acco07g0862 739 Gene3D Jelly Rolls 503 623 IPR014710 -
Acco07g0862 739 Gene3D Helix hairpin bin 433 496 - -
Acco07g0862 739 SMART cnmp_10 505 636 IPR000595 -
Acco07g0862 739 MobiDBLite consensus disorder prediction 718 739 - -
Acco07g0862 739 Pfam Ion transport protein 103 432 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco07g0862 739 ProSiteProfiles cAMP/cGMP binding motif profile. 505 635 IPR000595 -
Acco07g0862 739 SUPERFAMILY cAMP-binding domain-like 435 625 IPR018490 -
Acco07g0862 739 Coils Coil 658 678 - -
Acco07g0862 739 MobiDBLite consensus disorder prediction 667 683 - -
Acco07g0862 739 SUPERFAMILY Voltage-gated potassium channels 96 427 - -
Acco07g0862 739 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 84 732 - -
Acco07g0862 739 MobiDBLite consensus disorder prediction 666 701 - -
Acco07g0862 739 CDD CAP_ED 505 636 IPR000595 -
Acco07g0862 739 FunFam Cyclic nucleotide-gated ion channel 1 432 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0862 Acco-ChrAcco07 11200732 11205719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0862 1 732 Ion Channels AT1G15990 64.745 0.0 940