Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0859 ATGGTTTATAGAGATGCGAGGGTTAGTTATGCCAAAAGATTCACAAAGAGATATACAAATTTGTTAGTATTCTTTGAAATTTCTTGGTTCTCCTCATCCCTTCATGCAGCTAAAAGACTAGCTTGTTCAATGGACAGCAACCAACCAGACAGGACAACCCAGAAAAAGACAGAAACAGAGGATCAACAACAACAACGTTATTCATCTTCTTCTTTGTCACCTCGTGCTTGTCTAGATCTAAGTCTCTCTAACTACCACTCTTCATCATCTTCTGAATCTCCCCATGGCGGCAGGATCTTCTCCTGCAACTACTGTCATAGAAAGTTCTACAACTCGCAGGCACTTGGGGGTCACCAGAACGCACACAAGCGAGAGAGAACTCTTGCAAAAAGACCTCACAACAACACCAGCGACGACAATGTTGGTAATGGTGCTTCTTCTGCTTCACATGTTTCTGCAAATTTTGAACGACTAAGGTACTATTATTATTCATGTATGGCTTCTCTTCCTCTGCATGGCTGCTCCTATAACAGACCACTTGGGATTCAGCTTCATTCCTTGATTCACAAGCCCACCTCCTCTTCTTCTTCTTCTTTTCAACCACCTCGTTTCCAGAAGAATATTCCATTATTCGGAGACTACCATGTTTGGACAGAATTAACTGAATCATCGTCATCTTCTTCTTCTTCTTCTTTATTAACTTCTGGGATTCCAAGGTTTTCTCCAAGGCCTGTCACAGGGGATCAGCTTCACAAACTTGACTTGTCCCTCAAACTGTGA 780 0.4218 MVYRDARVSYAKRFTKRYTNLLVFFEISWFSSSLHAAKRLACSMDSNQPDRTTQKKTETEDQQQQRYSSSSLSPRACLDLSLSNYHSSSSSESPHGGRIFSCNYCHRKFYNSQALGGHQNAHKRERTLAKRPHNNTSDDNVGNGASSASHVSANFERLRYYYYSCMASLPLHGCSYNRPLGIQLHSLIHKPTSSSSSSFQPPRFQKNIPLFGDYHVWTELTESSSSSSSSSLLTSGIPRFSPRPVTGDQLHKLDLSLKL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0859 259 ProSiteProfiles Zinc finger C2H2 type domain profile. 100 127 IPR013087 -
Acco07g0859 259 MobiDBLite consensus disorder prediction 134 148 - -
Acco07g0859 259 SUPERFAMILY beta-beta-alpha zinc fingers 96 127 IPR036236 -
Acco07g0859 259 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 57 230 IPR044246 GO:0009788
Acco07g0859 259 Gene3D Classic Zinc Finger 78 151 - -
Acco07g0859 259 MobiDBLite consensus disorder prediction 116 148 - -
Acco07g0859 259 ProSitePatterns Zinc finger C2H2 type domain signature. 102 122 IPR013087 -
Acco07g0859 259 MobiDBLite consensus disorder prediction 45 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0859 Acco-ChrAcco07 11155027 11159565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0859 98 259 C2H2 Transcription Factor Family AT1G80730 42.857 9.13e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco07g0859 None None None