Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0847 ATGGAGGAGGAAAAGAGACAATCGAGCAGGAGCGTCATCTTCAACAAGTACGAGATGGGGAGGCTCCTAGGGCAAGGGAATTTCGCTAAGGTCTACTATGGAAGAAACCTAGAGACCAACCAGAGTGTTGCGATTAAGGTGATTAAGAAGGAGAAGCTTGAGAAGGGGAAGCTGAAGCTGATGAAGCAGATCAAGCGTGAAGTGTCTATAATGCGATTGGTTCGACACCCACACATCGTGGAGCTGAAAGAAGTTATGGCCACAAAGGGAAAGATCTTTCTGGTTATGGAGTTTGTTAAAGGCGGTGAACTCTTCGCTAAGGTCACGAAAGGGAAAATGAAGGAAGATTTGGCGAGGAAATATTTCCAGCAGTTGATTTCCGCCGTCGATTTCTGTCACAGCCGCGGCGTCACCCACCGGGATCTGAAGCCAGAGAATCTCTTTGTCGACGAAAACGGGGATCTCAAGGTCTCCGACTTCGGGCTTTCGGCGTTGCCGGAGCAGCGCCGGTCCGACGGGATGCTCGTGACGCCGTGTGGTACGCCGGCTTATGTTGCGCCGGAGGTCTTGAAGAAGAAAGGCTACGATGGATCCAAAGCAGACATCTGGTCCTGTGGGGTAATTCTCTATGCTCTGCTTTCTGGGTATCTTCCATTTCAAGGTGAGAATGTGATGAGAATTTACAAGAAAGCGTTCAAAGCTCAATACGTATTACCAGATTGGATTTCACCAGAAGCAAAGAATTTAATCTCTAAATTACTAGTGGTGGACCCAGAAAAGAGATATTCGATCGAAGACATAATGAAGGATCCGTGGTTTCAATATGGGTTCATGAGACCAATCGCATTTTCAATGAAGGAACCAAGCTCAGAAGATTTCGATATCGAAGAAGTGGAAGAAACTGTGGGAGGAGAAAGAGGACAGGGAGGTAGTGAACAATCGCGGCCATTTTACAATGCGTTTGAGATAATTTCGTCCTTGTCACATGGGTTTGATCTGAGGAGCTTGTTTGAGACCAGGAAGAGGTCGCCGTCGATGTTCATGACAAAGTTCTCGGCGGCGGCGGTGGTGGGGAAGCTGGAGGCGGTGGCAAGTAAGCTGAATATGAGGGTGACGGGTAAGAAGGAGTACATGGTGAAGATGCAGGGGACGAAGGAGGGAAGGAAGGGGAAGCTGGGGATGACGGTGGAGGTGTTTGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGCTCACAAAGTCCTCCGGCGACACCTTGGAGTATGTGAAGCTGTGTGAGGAAGACGTGAGACCTGCACTCAAAGACATCGTCTGGAGTTGGCAAGGCGATACCAATCCTCCATCAATAAGCTAA 1350 0.4956 MEEEKRQSSRSVIFNKYEMGRLLGQGNFAKVYYGRNLETNQSVAIKVIKKEKLEKGKLKLMKQIKREVSIMRLVRHPHIVELKEVMATKGKIFLVMEFVKGGELFAKVTKGKMKEDLARKYFQQLISAVDFCHSRGVTHRDLKPENLFVDENGDLKVSDFGLSALPEQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENVMRIYKKAFKAQYVLPDWISPEAKNLISKLLVVDPEKRYSIEDIMKDPWFQYGFMRPIAFSMKEPSSEDFDIEEVEETVGGERGQGGSEQSRPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFMTKFSAAAVVGKLEAVASKLNMRVTGKKEYMVKMQGTKEGRKGKLGMTVEVFEVAPEVAVVELTKSSGDTLEYVKLCEEDVRPALKDIVWSWQGDTNPPSIS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0847 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Acco07g0847 449 FunFam Non-specific serine/threonine protein kinase 8 98 - -
Acco07g0847 449 ProSiteProfiles Protein kinase domain profile. 17 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0847 449 SUPERFAMILY Protein kinase-like (PK-like) 13 289 IPR011009 -
Acco07g0847 449 Pfam Protein kinase domain 17 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0847 449 ProSitePatterns Protein kinases ATP-binding region signature. 23 50 IPR017441 GO:0005524
Acco07g0847 449 SMART serkin_6 17 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0847 449 Gene3D Kinase associated domain 1, KA1 320 438 - -
Acco07g0847 449 Gene3D Transferase(Phosphotransferase) domain 1 9 319 - -
Acco07g0847 449 Pfam NAF domain 317 372 IPR004041 GO:0007165
Acco07g0847 449 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 433 - -
Acco07g0847 449 CDD CIPK_C 319 433 - -
Acco07g0847 449 FunFam Non-specific serine/threonine protein kinase 313 437 - -
Acco07g0847 449 FunFam Non-specific serine/threonine protein kinase 10 314 - -
Acco07g0847 449 ProSiteProfiles NAF domain profile. 313 338 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0847 Acco-ChrAcco07 11015562 11016911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0847 1 447 CBL-interacting serine-threonine protein kinases AT5G10930 62.864 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco07g0847 Pkinase 3e-77 CL0016