Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0830 ATGACCGCTGAGCAATCAGGTGTTTCTCAGGGATTCCGAAAGATAGTGCCCGACAAATGGGAATTCGCCAACGAATATTTCAAGCAAGACACAAGTAGCTGCTCTCTGAGATCAAACGCCGAAAGACCCTCGCTCAATAAGTCTCTGGGAGATGGGGTTGAATCTGGATCAAGTGATGGGGTTGAATCTAAAGAATGTAGACCAGGGATGATGTCTTCTTTGATCCGTTTAATTGTTTTTCGGGTGAGTTTGGGAATATTTTTAGGCGGAGCATGAGGCAACCTGGAAGAGATCAAGAAGGAGAATGTCGACCTCGAGAGAATACCGATAGAGGAAGTGTTTCAAGAATTGAACTGTTCGAAAGAGGGTTTGACTGATGAAGAGGGTCAAAGGAGACTCGCAGTTTTTGGGTCCAACAAGCTTGAAGAAAAGAAGGAAAGCAAGATTCTGAAATTCTTGGGCTTCATGTGGAATCCTCTATCTTGGGTCATGGAATTAGCTGCTATCATGGCTATCGCTTTGGCCAATGGAGGGGGCCGACCACCAGATTGGCAGGATTTTGTAGGAATTGTGGCATTGCTCATCATCAACTCAACTATTAGTTTCATTGAAGAAAACAATGCAGGGAATGCTGCAGCAGCACTTATGGCAAGCCTTGCATTGAAAACTAAGGTTTTGAGGGATGGAAAGTGGACTGAGCGTGATGCATCTGTCTTGGTACCTGGAGATGTAATCAGCATCAAATTAGGAGATATTATCCCTGCAGATGCTCGTCTCTTGGAAGGAGACCCTTTAAAGATTGATCAGTCTGCACTTACTGGTGAGTCTTTGCCAGTTTCGAAGAACCCATCTGATGAAGTCTTCTCAGGGTCAACCGTGAAGCAAGGAGAGATCGAGGCTGTTGTGATTGCCACTGGGGTACACACTTTCTTTGGTAAAGCTGCTCACTTGGTTGACAATACTAACCAAGTGGGACACTTTCAAAAGGTGTTGACGGCCATTGGCAACTTCTGCATTTGTACAATAGCAATAGGGATGCTTGTAGAAATAATTGTGATGTACCCGATTCAACATCGCAACTATAGGAGTGGAATTGACAACCTCTTGGTGCTCCTCATCGGAGGGATTCCAATTGCCATGCCTACAGTCTTATCAGTAACAATGGCCATTGGATCTCATAGGTTGTCACAGCAAGGTGCTATCACTAAGAGGATGACAGCCATTGAGGAGCTTGCTGGCATGGATGTTCTATGCAGTGACAAGACTGGCACCTTAACACTCAACAAGCTCACAGTTGACAAAACCTTGATTGAGGTCTTCGAAAAAGATATAGACAAGGACACTGTAATATTGCAGGGAGCTAGAGCCTCAAGGGTAGAGAATCAAGATGCTATTGATGCTTGTATTGTTGGAATGTTGGGTGACCCAAAGGAGGCCAGAGATGGCATCACAGAGGTGCATTTCCTTCCCTTTAATCCAGTGGACAAGCGTACGGCCATAACATACATTGACTCTGCAGGCAATTGGCACAGAGTAAGCAAAGGAGCACCAGAACAGATTGTAGAACTCTGTAATCTCAGAGAAGATATAAAGAAAAAAGTTCATTCCATTATTGATAAGTTTGCCGACCGCGGTCTGCGTTCTCTCGCTGTTGCAAGACAAGAAGTGCCAGAAAAGACCAAGGAGAGTCCAGGATCACCATGGCAGTTTGTGGGTCTCTTACCACTTTTTGATCCTCCAAGGCATGATAGTGCAGAGACTATCACACGAGCTCTCCATCTCGGTGTGAATGTTAAGATGATTACTGGTGATCAACTAGCTATTGGGAAGGAGACTGGCCGTAGGCTTGGCATGGGAAGCAATATGTATCCTTCTTCCTCTCTTCTTGGTGAACACAGGGATGAGTCTATTGCTGCACTTCCAATTGATGAGCTTATCGAGACAGCTGATGGCTTTGCCGGCGTCTTTCCTGAGCACAAATATGAGATAGTGAAGAGACTACAAGATAGGAAACACATATGTGGAATGACTGGAGATGGTGTGAATGATGCTCCTGCATTGAAAAAGGCAGATATTGGGATTGCAGTGGCTGATGCAACCGATGCAGCTAGAAATGCATCTGACATAGTTTTGACAGAACCTCGTTTAAGTGTGATTATCAGTGCGGTATTAACAAGCAGAGCCATTTTCCAAAGAATGAAGAACTACACCATCTATGCAGTTTCTATAACAATCCGAATTGTGTTGGGCTTTCTCTTGCTTGCCCTTATCTGGAAATTTGATTTTGCACCTTTTATGGTTCTGATCATTGCCATACTAAATGATGGGACCATTATGACCATTTCTAAGGACAGAGTCAAGCCATCACCTTCTCCAGATTCATGGAAACTCAATGAGATTTTCGCCACTGGAATAGTACTTGGAACCTACCTGGCTGTCATGACTGTTATCTTCTTCTGGGCTGCTCATGATACAGACTTCTTCACAGATAAATTCGGCGTTAGATCAATTAGAGAAAGTCCTGGTGCACTAACCTCAGCTGTTTATCTTCAAGTGAGTATTGTGAGTCAGGCTCTCATCTTTGTCACTCGGTCAAGAAGCTGGTCTTATGTTGAACGCCCTGGTTTCTTGCTGTTGGGAGCCTTCCTCATAGCACAATGTGCTGCAACACTAATAGCGGCGTACCCAAATTGGGGATTTGCAAATATCGAAGGTATCGGATGGGGCTGGGCAGGAGTAATATGGCTGTACAGCATTATCTTCTACATTCCATTAGATATCCTAAAGTTCATAATCCGATATGCATTGAGTGGGAAAGCATGGAAAAATATTACAGAGACCAGGGTTGCTTTCACATCAAGGAGGGATTACGGTAGAGGAGAACGAGAAGCTCAATGGGCTGCATCTCAACGTACCCTTCATCGTCTCAATCCACCTCAAATCGAGCAATTCCTCAATGAAATGAGGATGAGCAACTATGGCGAATTGTCCGAACTCGCAGAATCAGCTAAGAAACGCGCTGAACGTGCAAGGATAAGGGAGGTTCACACGCTGAAGGGTCATGTGGAATCAGTGGTGAAATTGAAGGGGCTTGACATTGATACGATTCAGCAAAACTACACAGTTTGA 3129 0.4452 MTAEQSGVSQGFRKIVPDKWEFANEYFKQDTSSCSLRSNAERPSLNKSLGDGVESGSSDGVESKECRPGMMSSLIRLIVFRVSLGIFLGGAXGNLEEIKKENVDLERIPIEEVFQELNCSKEGLTDEEGQRRLAVFGSNKLEEKKESKILKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGIVALLIINSTISFIEENNAGNAAAALMASLALKTKVLRDGKWTERDASVLVPGDVISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVSKNPSDEVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDNTNQVGHFQKVLTAIGNFCICTIAIGMLVEIIVMYPIQHRNYRSGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLTVDKTLIEVFEKDIDKDTVILQGARASRVENQDAIDACIVGMLGDPKEARDGITEVHFLPFNPVDKRTAITYIDSAGNWHRVSKGAPEQIVELCNLREDIKKKVHSIIDKFADRGLRSLAVARQEVPEKTKESPGSPWQFVGLLPLFDPPRHDSAETITRALHLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGEHRDESIAALPIDELIETADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADIGIAVADATDAARNASDIVLTEPRLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLNEIFATGIVLGTYLAVMTVIFFWAAHDTDFFTDKFGVRSIRESPGALTSAVYLQVSIVSQALIFVTRSRSWSYVERPGFLLLGAFLIAQCAATLIAAYPNWGFANIEGIGWGWAGVIWLYSIIFYIPLDILKFIIRYALSGKAWKNITETRVAFTSRRDYGRGEREAQWAASQRTLHRLNPPQIEQFLNEMRMSNYGELSELAESAKKRAERARIREVHTLKGHVESVVKLKGLDIDTIQQNYTV 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0830 1042 SFLD p-type atpase 400 729 IPR044492 -
Acco07g0830 1042 CDD P-type_ATPase_H 123 930 IPR006534 GO:0008553|GO:0016020|GO:0120029
Acco07g0830 1042 ProSitePatterns E1-E2 ATPases phosphorylation site. 420 426 IPR018303 -
Acco07g0830 1042 PRINTS P-type cation-transporting ATPase superfamily signature 594 604 - -
Acco07g0830 1042 PRINTS P-type cation-transporting ATPase superfamily signature 700 712 - -
Acco07g0830 1042 PRINTS P-type cation-transporting ATPase superfamily signature 418 432 - -
Acco07g0830 1042 PRINTS P-type cation-transporting ATPase superfamily signature 572 583 - -
Acco07g0830 1042 PRINTS P-type cation-transporting ATPase superfamily signature 677 696 - -
Acco07g0830 1042 PRINTS P-type cation-transporting ATPase superfamily signature 268 282 - -
Acco07g0830 1042 PRINTS H+-transporting ATPase (proton pump) signature 649 665 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0830 1042 PRINTS H+-transporting ATPase (proton pump) signature 849 870 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0830 1042 PRINTS H+-transporting ATPase (proton pump) signature 677 693 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0830 1042 PRINTS H+-transporting ATPase (proton pump) signature 534 552 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0830 1042 PRINTS H+-transporting ATPase (proton pump) signature 708 733 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0830 1042 FunFam Plasma membrane ATPase 221 305 - -
Acco07g0830 1042 SUPERFAMILY HAD-like 414 724 IPR036412 -
Acco07g0830 1042 Coils Coil 993 1013 - -
Acco07g0830 1042 Pfam haloacid dehalogenase-like hydrolase 414 691 - -
Acco07g0830 1042 Gene3D - 415 714 IPR023214 -
Acco07g0830 1042 Gene3D - 430 577 IPR023299 GO:0000166
Acco07g0830 1042 PANTHER CALCIUM-TRANSPORTING ATPASE 106 972 - -
Acco07g0830 1042 NCBIfam HAD-IC family P-type ATPase 190 438 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0830 1042 NCBIfam HAD-IC family P-type ATPase 652 767 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0830 1042 SMART Cation_ATPase_N_a_2 104 176 IPR004014 -
Acco07g0830 1042 Gene3D - 183 904 - -
Acco07g0830 1042 SUPERFAMILY Calcium ATPase, transduction domain A 222 318 IPR008250 -
Acco07g0830 1042 FunFam Plasma membrane ATPase 570 725 - -
Acco07g0830 1042 SFLD C1.7: P-type atpase like 400 729 - -
Acco07g0830 1042 MobiDBLite consensus disorder prediction 38 53 - -
Acco07g0830 1042 FunFam ATPase 4 plasma membrane-type 662 904 - -
Acco07g0830 1042 Gene3D - 991 1042 - -
Acco07g0830 1042 Gene3D - 221 305 - -
Acco07g0830 1042 Pfam Cation transporter/ATPase, N-terminus 108 170 IPR004014 -
Acco07g0830 1042 Pfam E1-E2 ATPase 221 397 - -
Acco07g0830 1042 FunFam Plasma membrane ATPase 430 577 - -
Acco07g0830 1042 MobiDBLite consensus disorder prediction 38 63 - -
Acco07g0830 1042 NCBIfam plasma-membrane proton-efflux P-type ATPase 123 895 IPR006534 GO:0008553|GO:0016020|GO:0120029
Acco07g0830 1042 SUPERFAMILY Calcium ATPase, transmembrane domain M 103 936 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0830 Acco-ChrAcco07 10582662 10589174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0830 96 1042 Primary Pumps ATPases AT3G42640 82.154 0.0 1592