Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco07g0829 | ATGAATCCTAGCTGCAACTTGAGGTTTGAATTATACCGATTTTATAATAACAATGTAAGTGTTGTTTTAGAGCCACCTGCATATCCCCCAGATAATAGTGGTGTTTCAGAAATAACAGGAAAAAATGAAGGCCACTCGCGAATAATCATAATAGCGGTGTCCCTTGGTGTTGTCTCGATCACGCTTTTTTGTTTTGGCATTTATTACTGGAAGAGAAAAAAGAGCCAGTTGAGTTATAAGGCGATTCTGAAGAAAAATTATAAGTTCTCGATTGAGAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACATGGGCGTTTTCCCCGATGGTAGCAAAATAGCTGTAAAGAGATTGTCTGAAAATTCTAGTCAAGGTTTAATAGAATTCAAGAACAAGGTTCTATTAATTGCCAAACTTCAACACAGAAACCTGGTGGCTTTGTTGGGATTTTGCTTGAAAGATCAAGATAAAATACTTGTTTATGAATATGTTCCCAACAAGAGCCTTGATTACTTTTTATTTGGTCCACAAAAGCCAAGAGAGTTGAATTGGCCCGAGCGATATAAAATTATAGAAGGAATTGTTCAAGGAATTCATTACCTCCATGAACATCCACGCCTTAAAGTAATACATCGAGATCTTAAACCTAGTAATATTTTGTTAGATGATGAGATGAATCCAAAAATTTCTGATTTTGGCATGGCAAGAATGGTTGGTATTAATGAAACTAGGGGGAGCACAAATAGAATTGTTGGAACATTGGGCTACATGTCTCCAGAATATCTTAAGTTTGGACTATTTTTTGAGAAATCAGATGTTTTCAGCTTTGGAGTCATTATTTTGGAAATTATAAGTAGAAAGAATATAAATTCTGAAAGTGAACCTCATGAATCTCAATATGATGGTGGACTCTTAAATGATGCTTGGAAGCATTGGAAGGGTGAAAATTTGATAGCCATATTGGATTCAAATATGATAGAAACAGGGTCACACAGTGAAATAATGAGATGCATCCATATTGGCTTGTTGTGTGTTCAAGGAAATCCACAAGTTAGGCCTTCCATGAATAAAGTTGTTAAATATATAAGTAATGATTCAATAAAGTTGCCAATTCCTCACGAACCAGCATTCTTCTTGCATAGTCAAATGGAAATAGCAGAAACCAGTAGAGCAATGGTGGCTCAACTTGTCGACCACAATCAATATTCCATCAATGAAATATCGGAGAGTGTATTATTTCCTCGCTAG | 1251 | 0.3573 | MNPSCNLRFELYRFYNNNVSVVLEPPAYPPDNSGVSEITGKNEGHSRIIIIAVSLGVVSITLFCFGIYYWKRKKSQLSYKAILKKNYKFSIENRIGKGGFGEVYMGVFPDGSKIAVKRLSENSSQGLIEFKNKVLLIAKLQHRNLVALLGFCLKDQDKILVYEYVPNKSLDYFLFGPQKPRELNWPERYKIIEGIVQGIHYLHEHPRLKVIHRDLKPSNILLDDEMNPKISDFGMARMVGINETRGSTNRIVGTLGYMSPEYLKFGLFFEKSDVFSFGVIILEIISRKNINSESEPHESQYDGGLLNDAWKHWKGENLIAILDSNMIETGSHSEIMRCIHIGLLCVQGNPQVRPSMNKVVKYISNDSIKLPIPHEPAFFLHSQMEIAETSRAMVAQLVDHNQYSINEISESVLFPR | 416 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco07g0829 | 416 | ProSiteProfiles | Protein kinase domain profile. | 89 | 378 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco07g0829 | 416 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 29 | 413 | - | - | |
| Acco07g0829 | 416 | Pfam | Protein kinase domain | 90 | 361 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco07g0829 | 416 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 | 70 | 164 | - | - | |
| Acco07g0829 | 416 | CDD | STKc_IRAK | 95 | 363 | - | - | |
| Acco07g0829 | 416 | FunFam | cysteine-rich receptor-like protein kinase 10 | 165 | 370 | - | - | |
| Acco07g0829 | 416 | Gene3D | Phosphorylase Kinase; domain 1 | 65 | 164 | - | - | |
| Acco07g0829 | 416 | SUPERFAMILY | Protein kinase-like (PK-like) | 73 | 362 | IPR011009 | - | |
| Acco07g0829 | 416 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 210 | 222 | IPR008271 | GO:0004672|GO:0006468 | |
| Acco07g0829 | 416 | Gene3D | Transferase(Phosphotransferase) domain 1 | 165 | 370 | - | - | |
| Acco07g0829 | 416 | SMART | serkin_6 | 89 | 363 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco07g0829 | 416 | ProSitePatterns | Protein kinases ATP-binding region signature. | 95 | 117 | IPR017441 | GO:0005524 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco07g0829 | Acco-ChrAcco07 | 10530391 | 10532568 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco07g0829 | 1 | 409 | Receptor kinase-like Gene Family | AT4G21410 | 43.146 | 1.15e-117 | 356 |
Transcription factors information