Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0828 ATGGATAAAGACGATGTTTTCAATGAGCTCAGATTCAATGACTCAATTTATGAGGAGGACCTCTTTATTAGGGAGATCCTTCGCCAACCTTGTTTCTCTTCCGTGAGTGACATTTTCAACACCATCACCACCGCTGATACTGGTGGTGCTGCCGTAACAACCACCACTGTCAGTAGCTTATCCTCCGGCATCAGCCAATCCATAAATGACAGCCCCAGTTCAGGACATGCTAGTTTCTGCGACAAACCGGCAACCTCATCTTCTCAGGCAACATATATTCTATCTTTCGATAGCTCAACTATAATACCGCCGACCACTGGTGATAACGCCAGTTATGAGAAACATGAACCTGCAAACACCCATGCTTCTTCACTAAAACGAACTCCGGAAAACAATGAGAGTGAGTCAAAGGCCCATCAAAAGAAAGTGAAGATTAGAAACTCATCTGAGACATTGGATCACATAATGTCTGAGAGAAAAAGGAGACAACAACTCTATGAGAAGTTTATCGCCCTCTCAGCTACAATTCCTGGTTTGAAGAAGATCGACAAGTCATCTGTACTAAGCGAAGCTATCAATTACATGAAGAAGCTTAAAGAACGAGTGAGAGAGTTAGAGGAACAGAACAAGAAGATAAGAGATGATAGTGAGTCATTACTATTAATGCCAAGCATAAAGAAATCACCATGTCACCACCTCAACGCTAAGGATAATGATCATCATCATCGTCAAGACACAATATCTTCTTCTGAAACAATGAGCTCTAATGACAATTGCTTCAGAATAATCAACAAATCATTGCCTGAGGTTGAAGCAAGAGTGTTGCACAACCAAGTTCTCATCAGAATCCTCTGTGAGAAGCATGAAAGTGTGATGCTTACTATATTCGCCCAACTCAAAAGCCTCAATTTTTCTATTATCAACTCTAGCGTCTTAAATTTTGACAATTCCGCTCTTGACATCACCATTATAGCTGAGGTTGAGGAACACAAAATAGCTGTGAAGGAAGTTGTGAAAAAGCTTCGATTGGCCTTGTTGGAGACCTCTCACAACCAGTAA 1059 0.4117 MDKDDVFNELRFNDSIYEEDLFIREILRQPCFSSVSDIFNTITTADTGGAAVTTTTVSSLSSGISQSINDSPSSGHASFCDKPATSSSQATYILSFDSSTIIPPTTGDNASYEKHEPANTHASSLKRTPENNESESKAHQKKVKIRNSSETLDHIMSERKRRQQLYEKFIALSATIPGLKKIDKSSVLSEAINYMKKLKERVRELEEQNKKIRDDSESLLLMPSIKKSPCHHLNAKDNDHHHRQDTISSSETMSSNDNCFRIINKSLPEVEARVLHNQVLIRILCEKHESVMLTIFAQLKSLNFSIINSSVLNFDNSALDITIIAEVEEHKIAVKEVVKKLRLALLETSHNQ 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0828 352 MobiDBLite consensus disorder prediction 128 147 - -
Acco07g0828 352 Gene3D - 147 220 IPR036638 GO:0046983
Acco07g0828 352 MobiDBLite consensus disorder prediction 104 127 - -
Acco07g0828 352 Pfam Helix-loop-helix DNA-binding domain 154 198 IPR011598 GO:0046983
Acco07g0828 352 SMART finulus 155 204 IPR011598 GO:0046983
Acco07g0828 352 MobiDBLite consensus disorder prediction 104 147 - -
Acco07g0828 352 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 219 IPR036638 GO:0046983
Acco07g0828 352 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 198 IPR011598 GO:0046983
Acco07g0828 352 PANTHER BHLH TRANSCRIPTION FACTOR 49 347 - -
Acco07g0828 352 Coils Coil 188 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0828 Acco-ChrAcco07 10500123 10503111 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0828 146 345 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 46.269 8.62e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco07g0828 HLH 1.5e-07 No_clan