Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0826 ATGGATCATGAGGACGATTTTTTAAATGAACTCAGCCTCTATGACTCGATTTATGAGGAGGACTTCTTCCTTAGGGAGATCCTTCACCAACCTTGTTTCTCTTCCGTGAGTGACATTATCAACACCACCACCACCACCGCTGATACTGGTGATGCTGCCGTAACAACCACCACTGTCAGTAGCTTATCCTCCGGCGCCAGCCCCAAATATGACAGCCCCAGTTCGGGACATGCTAGTTTCTGCGACAAACCGTCAAACACATCTTCTCATCAGTCAACTTATATTCTATCTTTTGATAACTCAACGGTAATGCCAGTGACCGCCGATGACGCTGGCTGTTATGAGAAACATGAAGCTGCAAACACGCGTGCTTCTTCGCTAAAACGGACACCAGAAAACAAAGAGAGTGAGTCAAAGGCCTATCAAAAGACAAAAAAGAGTAGAAGTTCATCTGAGACATTGGATCACATAATGTCTGAGAGAAAAAGGAGACAAGAACTCTCTCAGAAGTTTATTGCACTTTCAGCTACAATTCCTGGTTTGAAGAAGATTGACAAGTCATCTGTACTAAGCGAAGCGATCGATTACGTGAAGAAACTTAAAGAACGAGTGAGAGAGTTAGAGGAACAGAATAAGAAAATAAGAGATGATAGAGAGTCATCATTAATACCAAGCATAAATAAATCACCATGGCACCACCTCAATGCTAAGGATAGTGATCATCATCCTTATCAAGACACAATATCTTCTTCTGAAACAATGAGTACCTCTGATGATAAATGCTTCAAAATAATCAACCAAGGATTGCCTGAGATTGAAGCAAGAGTGTTACACAACCAAATTCTCATCAGAATCCACTGTGAGAATCACAACAGCGTGATGCTTACTATATTCGCCCAACTGAAGAGCCTCCATCTCTCCATTATCAGCTCTAGCATTTTAAACTTTGCCAATTCCGCTCTTGACATCACCATTTTGGCTGAGGTTGATGAACACAAAATAGAAGTGAAGGAAGTAGTGAAAATGCTTCGATTGGCCCTGTTGGAGACCTATCACAACCAATAA 1065 0.4169 MDHEDDFLNELSLYDSIYEEDFFLREILHQPCFSSVSDIINTTTTTADTGDAAVTTTTVSSLSSGASPKYDSPSSGHASFCDKPSNTSSHQSTYILSFDNSTVMPVTADDAGCYEKHEAANTRASSLKRTPENKESESKAYQKTKKSRSSSETLDHIMSERKRRQELSQKFIALSATIPGLKKIDKSSVLSEAIDYVKKLKERVRELEEQNKKIRDDRESSLIPSINKSPWHHLNAKDSDHHPYQDTISSSETMSTSDDKCFKIINQGLPEIEARVLHNQILIRIHCENHNSVMLTIFAQLKSLHLSIISSSILNFANSALDITILAEVDEHKIEVKEVVKMLRLALLETYHNQ 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0826 354 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 151 200 IPR011598 GO:0046983
Acco07g0826 354 PANTHER BHLH TRANSCRIPTION FACTOR 26 350 - -
Acco07g0826 354 MobiDBLite consensus disorder prediction 60 84 - -
Acco07g0826 354 SMART finulus 157 206 IPR011598 GO:0046983
Acco07g0826 354 Pfam Helix-loop-helix DNA-binding domain 156 200 IPR011598 GO:0046983
Acco07g0826 354 MobiDBLite consensus disorder prediction 120 162 - -
Acco07g0826 354 Coils Coil 190 217 - -
Acco07g0826 354 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 215 IPR036638 GO:0046983
Acco07g0826 354 Gene3D - 150 222 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0826 Acco-ChrAcco07 10468846 10471211 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0826 70 347 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.671 1.59e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco07g0826 HLH 3.1e-08 No_clan