Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0823 ATGGATAAGGACGAGTTTTTAAATGAACTCAGCCTCAATGACTCAATTTATGAGGAGGAGGACTTCCTTATTAGGGAGATCCTTCAAGAACCTTGTTTCTCTTCCGTGAGTGACATTATGAACACTATCACCACCGCTGATACTGGTTGTGCCACCGTAACAACCACCACTGTCAGTAGCTTATCCTTGGACGACTCTGGCGGCAGTACATCCAAGCATAACAGCCCTAATTCGGGACTTGCTAGTTTCTGCGACAAATCTGCAACCTCATCTTCTCAGTCAACTTATATTCTATCTTTTGATAACTCAACAATGATACCGGCGACCACCGATGACAACGCCGGTTATGAGAAACATGAAGCTGTAAACACGCGTGCTTCTTCGCTAAAACGGACTCCGGTAAACAATGGCAGTGAGTTAAAAGCCCATCAAAAGACAAGAAAGAGTAGAAGTACATCTGAGTCATTGGATCACATCATGTCTGAGAGAAAAAGGAGACAAGAACTCTCTGAGAAGTTTATTGCACTTTCAGCTACAATTCCTGGTTTGAAGAAGATTGACAAGTCATCTGTATTAAGCGAAGCTATCGATTACATTACAAAGCTTAAAGAACGAGTGAGTGAGTTAGAGGAAGAGCGCAAGAAGATAAGAGATGATAGCAAGTCATTATTATTAATGTCAAGAAAAAATAAATCACCTTGCCACCACCTCAACGCTAAGGATAATGATCATCACCATCAAGACACAATATCTTCTTCTGAAACAATGAGTGCCTCTGATGATAAATGCTTCAAAACAATCAACGAAGGATTGCCTGAGGTTGAAGCAAGAGTGTTGCACAACCAAGTTCTCATTAGAATCCTCTGTGAGAAGCACAAAAACGTTATGCTTATTATATTGGCCCAACTCAACAGCCTCCATCTCTCCATTATCAACTCTGGCGTCTTGAACTTTGCCAATTCCGTTCTTGATATCACCATTATAGCTGAGGTTGAGGAACGCAAAATTGAAGTGAGGGAAGTTGTGAAAAAGCTTCGATTGGCTCTGTTGGAGACTTCTCACAGCCAATGA 1071 0.4146 MDKDEFLNELSLNDSIYEEEDFLIREILQEPCFSSVSDIMNTITTADTGCATVTTTTVSSLSLDDSGGSTSKHNSPNSGLASFCDKSATSSSQSTYILSFDNSTMIPATTDDNAGYEKHEAVNTRASSLKRTPVNNGSELKAHQKTRKSRSTSESLDHIMSERKRRQELSEKFIALSATIPGLKKIDKSSVLSEAIDYITKLKERVSELEEERKKIRDDSKSLLLMSRKNKSPCHHLNAKDNDHHHQDTISSSETMSASDDKCFKTINEGLPEVEARVLHNQVLIRILCEKHKNVMLIILAQLNSLHLSIINSGVLNFANSVLDITIIAEVEERKIEVREVVKKLRLALLETSHSQ 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0823 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 158 217 IPR036638 GO:0046983
Acco07g0823 356 MobiDBLite consensus disorder prediction 126 140 - -
Acco07g0823 356 MobiDBLite consensus disorder prediction 234 250 - -
Acco07g0823 356 MobiDBLite consensus disorder prediction 141 159 - -
Acco07g0823 356 Pfam Helix-loop-helix DNA-binding domain 158 202 IPR011598 GO:0046983
Acco07g0823 356 PANTHER BHLH TRANSCRIPTION FACTOR 56 351 - -
Acco07g0823 356 MobiDBLite consensus disorder prediction 111 159 - -
Acco07g0823 356 Coils Coil 328 348 - -
Acco07g0823 356 MobiDBLite consensus disorder prediction 233 255 - -
Acco07g0823 356 SMART finulus 159 208 IPR011598 GO:0046983
Acco07g0823 356 Coils Coil 192 226 - -
Acco07g0823 356 Gene3D - 156 226 IPR036638 GO:0046983
Acco07g0823 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 202 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0823 Acco-ChrAcco07 10442655 10446447 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0823 138 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.333 2.13e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco07g0823 HLH 2.4e-08 No_clan