Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0809 ATGGAGGTTCCATGGCAGAATTGGTTCTCGGATCTGGATATGGATGAGACTGGATTCTTGAATAATCAATCACAACACAAGACTTACTCTTTTGATGATGATGATGAGTTTCTTAAAGATATCTTTCACCAACCTTGTTTCTCTTCCGAGAGTGACAGTACTCACTCTTCCTCTGTTCAAACGAACGCCGCGTCAGATGGTGGTGGTTGCGCCGTTGTTACAACCTCCACTACCACCGTGAGTAGCTTATCTTTGGATAATGACTCCGGAGGCGGCGCCGGTCAGCTGAAACCTAATTGCTCAAGCTCAGTCCTCTCAAGACTTGGTAGCTTCTCAGACAATAAGCCTGTAGGAGCCTCATCGTCTCCGTCGACTTATATTCTGTCTTTTGATAACTCAACTGTACTACCAGCTACCTCCCGCGATGGTTACCGGAAACATGAATCCGCTGTGAAGAGTGGCAATAATGAGAAATTAGAGAATGGTACAGGACGACGAGGAGGAGGCGGCACACGCGCTTCTCAAAAACGAACCCTAGAAAACCAAAATGGTGATAATCATGAGCCAAAAGCTAATAATCAAGGGACAAAGAGGACTAGAAGTTCATCTGAGACACTGGATCACATTATGGCTGAGAGAAAAAGGAGACAAGAACTCACTGAGAAGTTTATTGCACTCTCAGCTACAATTCCTGGTTTGAAGAAGATTGACAAGGCGTCTATACTAAGCGAAGCTATCATTCACGTGAAGCAACTTCAAGAGCGTGTGAAAGAGCTAGAGGAACAGAACAAGAAGATGATAATCAGTACGATGGATCCTATGTCGTACAAGATGAAGAAGTCATTGTCATCGTCGTCGAGCAATAATAATAATAAAAATAATAATGATGAAGATGAAGACACGACGACCTCTGATATTGATGATGATTATTACTTCAGAACTAATGAAGCACTTCCTGAAGTTGAAGCAAGAGCTTTACACAGGGAAGTTATCATCCGAATCCGCTGCGAGAATCAGAAATGCGTTATTCTTAACTTGTTGGTCCAGCTACACAGTCTTCACTTCTCCAGTATCACTCATAGTGCCTTGCCATTTGGGAATTCTATTCTTGATATTACCATTATTGGTGAGGTTGATGAGGAACACAACATACCAATGAAGGAACTTGTGAAAAAGCTGAGAATGAATCTGTTGAAGAAGAAGCCATAG 1209 0.4251 MEVPWQNWFSDLDMDETGFLNNQSQHKTYSFDDDDEFLKDIFHQPCFSSESDSTHSSSVQTNAASDGGGCAVVTTSTTTVSSLSLDNDSGGGAGQLKPNCSSSVLSRLGSFSDNKPVGASSSPSTYILSFDNSTVLPATSRDGYRKHESAVKSGNNEKLENGTGRRGGGGTRASQKRTLENQNGDNHEPKANNQGTKRTRSSSETLDHIMAERKRRQELTEKFIALSATIPGLKKIDKASILSEAIIHVKQLQERVKELEEQNKKMIISTMDPMSYKMKKSLSSSSSNNNNKNNNDEDEDTTTSDIDDDYYFRTNEALPEVEARALHREVIIRIRCENQKCVILNLLVQLHSLHFSSITHSALPFGNSILDITIIGEVDEEHNIPMKELVKKLRMNLLKKKP 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0809 402 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 203 252 IPR011598 GO:0046983
Acco07g0809 402 SMART finulus 209 258 IPR011598 GO:0046983
Acco07g0809 402 PANTHER BHLH TRANSCRIPTION FACTOR 36 400 - -
Acco07g0809 402 Gene3D - 201 272 IPR036638 GO:0046983
Acco07g0809 402 MobiDBLite consensus disorder prediction 278 292 - -
Acco07g0809 402 MobiDBLite consensus disorder prediction 174 200 - -
Acco07g0809 402 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 206 273 IPR036638 GO:0046983
Acco07g0809 402 MobiDBLite consensus disorder prediction 278 307 - -
Acco07g0809 402 Coils Coil 242 269 - -
Acco07g0809 402 MobiDBLite consensus disorder prediction 48 69 - -
Acco07g0809 402 Pfam Helix-loop-helix DNA-binding domain 208 253 IPR011598 GO:0046983
Acco07g0809 402 MobiDBLite consensus disorder prediction 137 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0809 Acco-ChrAcco07 10275151 10278454 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0809 192 397 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.429 7.82e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco07g0809 HLH 3.3e-08 No_clan