Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0805 ATGGAGTGTCCATGGCAGAATTGGTTCTCAGATCTGGATATGGATGAGACTGGACTCTTCAATAATCAATCACAACACAAGACTTACTCATTTGATGATGATGATGATGATGATGATGAGTTTCTTAAAGAGATCTTTCATCAACCTTGTTTCTCTTCTGAGAGTGACAGTACTCACTCTTCCTCTATTCAATACACCAATGTCACCACCCCCGTCTCATCATTTGGTGGTGGTGGTGGTTCCACCGCTGCTACTACCCCCACCACCACCACCTTTAGCAGCTTACCTTTGGATATTGACTCCGGAGGCGGCGGCATCCAGCCGAAACCTAACGGTCCCGGCTCATCAATCCTCTCGGTACTTGGAAGCTTCTTGGACAACAAACCTGCAGTAGCCACATCTTCTCCGTCAACTTATATTCTCTCTTTTGATAACTCAACAGTACTACGAGCCACCTCTGGCGAAGGTTACAGGAGACATGAGTCCGCCATGAAGAGTGATAATCAAGAGAAATTGGAGAGTAGTATAGGAGGAGGCACAATGCGCGCTTCTCAAAAACGAACCCTAGAAAACCATAATAGTGATAGTCATCAGCCAAAAACTAATAACCAAGGGACAAAGAGGACTAGAAATTCGTCTGAGACGCTTGATCACGTAATGGCTGAGAGAAAAAGGAGACAAGAACTCACCGAGAAGTTTATTGCACTCTCAGCTACAATCCCGGGTCTCAAGAAGATTGACAAGGCTTCTATCCTAAGCGAAGCGATAATTCACGTGAAGCAACTTCAAGAGCGTGTGAAAGAGTTAGAGGAACAGAACAAGAAGATGATAAATAGTACTGTGAAGTCAACTTTGTCGTATAAGATGAAGAAGAAAAAGAAGATGATGAAGAAGAAGAAGTCACCATTTGCCTTGCCATTTGGTAACTCCATTCTTGATATCACCATTATTGCTAAGGGTGAAGAGGAACACAACATACCAGTGGAGGAACTTGTGAAAAAGCTGAGAATGACTCTCTTGAAGAAGTCAGTTGATTGA 1038 0.4345 MECPWQNWFSDLDMDETGLFNNQSQHKTYSFDDDDDDDDEFLKEIFHQPCFSSESDSTHSSSIQYTNVTTPVSSFGGGGGSTAATTPTTTTFSSLPLDIDSGGGGIQPKPNGPGSSILSVLGSFLDNKPAVATSSPSTYILSFDNSTVLRATSGEGYRRHESAMKSDNQEKLESSIGGGTMRASQKRTLENHNSDSHQPKTNNQGTKRTRNSSETLDHVMAERKRRQELTEKFIALSATIPGLKKIDKASILSEAIIHVKQLQERVKELEEQNKKMINSTVKSTLSYKMKKKKKMMKKKKSPFALPFGNSILDITIIAKGEEEHNIPVEELVKKLRMTLLKKSVD 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0805 345 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 216 278 IPR036638 GO:0046983
Acco07g0805 345 Gene3D - 212 288 IPR036638 GO:0046983
Acco07g0805 345 PANTHER BHLH TRANSCRIPTION FACTOR 304 342 - -
Acco07g0805 345 MobiDBLite consensus disorder prediction 169 187 - -
Acco07g0805 345 MobiDBLite consensus disorder prediction 155 217 - -
Acco07g0805 345 Coils Coil 252 279 - -
Acco07g0805 345 Pfam Helix-loop-helix DNA-binding domain 218 263 IPR011598 GO:0046983
Acco07g0805 345 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 213 262 IPR011598 GO:0046983
Acco07g0805 345 SMART finulus 219 268 IPR011598 GO:0046983
Acco07g0805 345 MobiDBLite consensus disorder prediction 195 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0805 Acco-ChrAcco07 10156483 10158905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0805 202 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 60.256 6.26e-24 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco07g0805 HLH 2.7e-08 No_clan