Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0804 ATGGACGATGCTGAAGACTTCCACGGCCAATTTTGTCACATGTTGTTGTCTTTTGATGAGGAAGACGAAGATTTTCTCAGAAACATTCTTCAGCAGCAACCTACAGCTGGTGGAAATAATATCAGTAACAATAATAATTATAATAATCACTTGTCTTCTTCTCCTCCTCCTCAAAGCAGAGATAAATCATCCTTTCCCATGGTCGATTTCTCTAACGACAGCTCTGGCGGCAACCGTCATGGTGGTGGTGGTTTGAATAAGGACGACAAAAGCAGCGTGTTTTCTGCTAATAAAGCATGCATTTTAGCATTTCATCAATCCAACGTATTACCAGCAGAAGAAGAAGGAATCCCAAAACGCGAAGAATCTAGCACCTCCGAACTTTGTTCATTAAAAAGGAACAGAGACCAGACATATAATAATGTTGTTGAGCCAAGAAAGAAGACTAGAAGGAGTTCGGAGACAGCGAATCACATAATGGCCAAGAGGAGGAGGAGGCAACAACTCACAGAGAGATTTATTGCACTTTCTGCAACTATTCCGGGCTTGAAGAAGATGGACAAAGCCACGATTCTTCAAGAAGCGACGAAATACGTGAAACAGCTTCAAGAACGAGTAACAGAGCTAGAGAAACAAAATAGCGTAATAATAAACACTTCATCGTCATCTTCAGATCAGAAATCATCAATGAGATCGGTAAAGAAATATTGTGAGCTACACAGAGTTAATATTGATGATGATGATGATAAGCATTGTGAAGACAAAAATGAATTGTTGCCTCAGATTGACGCAAAAGTGTTGGAGAACCAAGTGCTGTTTGGGATCTATTGTGAGAAGCAAAAGGGCATTGAGTTTATAATATTAAATTTGCTTGAGAGTTTTCATCTTTATGTCACTAGCAGCAGCGTCTTGCCTTTTGGGAATTCCACTCTTGGTATCACCATCATTGCCCAGGTAATTACAACCGCTCAAGAGTCCTTAGATACCTTTAAGCGATAA 999 0.3994 MDDAEDFHGQFCHMLLSFDEEDEDFLRNILQQQPTAGGNNISNNNNYNNHLSSSPPPQSRDKSSFPMVDFSNDSSGGNRHGGGGLNKDDKSSVFSANKACILAFHQSNVLPAEEEGIPKREESSTSELCSLKRNRDQTYNNVVEPRKKTRRSSETANHIMAKRRRRQQLTERFIALSATIPGLKKMDKATILQEATKYVKQLQERVTELEKQNSVIINTSSSSSDQKSSMRSVKKYCELHRVNIDDDDDKHCEDKNELLPQIDAKVLENQVLFGIYCEKQKGIEFIILNLLESFHLYVTSSSVLPFGNSTLGITIIAQVITTAQESLDTFKR 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0804 332 MobiDBLite consensus disorder prediction 34 89 - -
Acco07g0804 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 202 IPR011598 GO:0046983
Acco07g0804 332 MobiDBLite consensus disorder prediction 34 79 - -
Acco07g0804 332 MobiDBLite consensus disorder prediction 114 129 - -
Acco07g0804 332 Pfam Helix-loop-helix DNA-binding domain 156 203 IPR011598 GO:0046983
Acco07g0804 332 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 155 218 IPR036638 GO:0046983
Acco07g0804 332 Coils Coil 192 219 - -
Acco07g0804 332 MobiDBLite consensus disorder prediction 113 165 - -
Acco07g0804 332 SMART finulus 159 208 IPR011598 GO:0046983
Acco07g0804 332 MobiDBLite consensus disorder prediction 139 165 - -
Acco07g0804 332 Gene3D - 143 217 IPR036638 GO:0046983
Acco07g0804 332 PANTHER BHLH TRANSCRIPTION FACTOR 23 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0804 Acco-ChrAcco07 10116032 10117595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0804 149 320 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 42.373 1.12e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco07g0804 HLH 3.6e-09 No_clan