Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0803 ATGTGACATATGGAGGGTGCTGAAGACTTTCACGGCCAATTTTGTCACATGATGATGTCTTTTGATGAGGAAGACGAAGAGTTTCTCAGAAACATTCTCCAGCATCAGCCTGCAGCAGGTGGAAATAATATTAGTGATAATAATAAGAATAATAATCACTTGTCTTCTTCTTCTTCTCAAAGCAGAGATAAATCATCCTTTCCCACGGTCGATTTCAACCGTCATGTTGGTGGTAGTTCGAATGAGGACGACAAAAGCCGCGTGTTGTCTGCTAATAAAGCATACATTTTAGCATTTGATCAATCCAACGTATTACCATCAGAAGAAGAAGGAATCCCAAAACGCGAAGAATCTAGTACCTCCGAACTTTTTTCATTGAAAAGAAACGGAGATCAGACATGTAATAATGTTATTGAGCCCAGAAAGAAGAGTAGAAGCGGTTCGGAGACAATGAATCACATCATGGCCGAGAGGAGGAGGAGGCAACAACTCACAGAGAGATTTATTGCACTTTCTGCAACTATTCCGGGCTTGAAGAAGATGGACAAAGGCACGATTCTTCAAGAAGCGACGAAATACGTGAAGCAGCTTCAAGAACGAGTAACAGAGCTTGAGAAACAAAATAGCATAATAATAAACACTCCTTTATCATCTTCAGATCAGAAATCATCAATGAGATCGGTAAAGAAATATTGTGAGCTACACAGAGTTAATATTAATGATGATGATGACAAGTGTTGTGAAGCCAAAAATGAATTGTTGCCTCAGATTGACGCAAAAGTGTTGGAGAATCAAGTGCTATTTGGGATCTATTGTGAGAAGCGAAAGGGAATTGAGTTTAAAATATTAAATTTGCTTGAGAGTTTTCATCTTTATGTCACTAGCAGCAGCGTCTTGCCTTTTGGGAATTCCACTCTTGGTATCACCATCATTGCCCAGATGGGGGAGGAATACAGAATGACAGTGAATGAAGTGATGAAAAACCTACAACAAGTGCTATCAAAGTCGCAGGAGGAAGTTGATCTGTGCTAG 1032 0.3973 MXHMEGAEDFHGQFCHMMMSFDEEDEEFLRNILQHQPAAGGNNISDNNKNNNHLSSSSSQSRDKSSFPTVDFNRHVGGSSNEDDKSRVLSANKAYILAFDQSNVLPSEEEGIPKREESSTSELFSLKRNGDQTCNNVIEPRKKSRSGSETMNHIMAERRRRQQLTERFIALSATIPGLKKMDKGTILQEATKYVKQLQERVTELEKQNSIIINTPLSSSDQKSSMRSVKKYCELHRVNINDDDDKCCEAKNELLPQIDAKVLENQVLFGIYCEKRKGIEFKILNLLESFHLYVTSSSVLPFGNSTLGITIIAQMGEEYRMTVNEVMKNLQQVLSKSQEEVDLC 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0803 343 Coils Coil 187 214 - -
Acco07g0803 343 PANTHER BHLH TRANSCRIPTION FACTOR 27 335 - -
Acco07g0803 343 Gene3D - 140 212 IPR036638 GO:0046983
Acco07g0803 343 MobiDBLite consensus disorder prediction 36 76 - -
Acco07g0803 343 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 213 IPR036638 GO:0046983
Acco07g0803 343 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983
Acco07g0803 343 SMART finulus 154 203 IPR011598 GO:0046983
Acco07g0803 343 Pfam Helix-loop-helix DNA-binding domain 151 198 IPR011598 GO:0046983
Acco07g0803 343 MobiDBLite consensus disorder prediction 28 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0803 Acco-ChrAcco07 10094059 10096722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0803 144 334 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.229 2.04e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco07g0803 HLH 1e-10 No_clan