Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0802 ATGGAGAATATCTTCTGGCAAGCCAGCCGCCTTCCGTATCTGGGAACAAATGACGATGGTGAGCAACTTCTCTGGCCTCATCAACAAAGCAGTACTACTTCACAGAACCCTGAAAATGATGACTTGATATTGTCTCATATCAAATCCTATAATCATGTGTGTTTTGATAACTCTGATGTTGTTGTTGAGAGAGTACCAATTATTAGTACGCAACAAATATATGGTGGTGGTGATGATGATGTTTCTGGGAATCAATTATTTGGGAGTAGAACGAAGGGAGGAACGAGGAAGGTGCAGGGTGGTCGTAGTAGGAACCCTAAATATGGGACGACATCATTAGATCACGTAATGGCTGAGAGAAATAGAAGACATGTATTGGCTGAGAAATTCATTGCTCTTTCAGCTACTATTCCTGGCTTGAAAAAGAAGGACAAGGCATCAGTACTTGATGGAGCCATCAATTACGTCAAGCAACTTCAAGAACGAATCAAAGAGTTAGAGGAGAAAGCCAACAACAAGGAGAAAAGCATAGAGAAAGCATATTCTTGTGGACACAACAGCTACGACCACGAGGACGACGACGTGGTGCCTGCTGACGTGGAAGCAAGAGCTTCAGGGAAAGAAGTACTCATAAGAATTCAGTGTAAGAAACAAAATGGAATTATGCGCAACATTGCATCTCTCCTTGAAAGCTCTCATCTCACCATAACCCATAGCACGGTATTACCATTTGGAAACACTACTCTCTACATCACCATTATCACCCAGATGCGTGATGAATACGGCGTGATAGTGAATGATCTGGTGAAGAATTTGAGACGAGATCTCTTTACTTTACGTGAGGGTGCATGCTAG 855 0.4246 MENIFWQASRLPYLGTNDDGEQLLWPHQQSSTTSQNPENDDLILSHIKSYNHVCFDNSDVVVERVPIISTQQIYGGGDDDVSGNQLFGSRTKGGTRKVQGGRSRNPKYGTTSLDHVMAERNRRHVLAEKFIALSATIPGLKKKDKASVLDGAINYVKQLQERIKELEEKANNKEKSIEKAYSCGHNSYDHEDDDVVPADVEARASGKEVLIRIQCKKQNGIMRNIASLLESSHLTITHSTVLPFGNTTLYITIITQMRDEYGVIVNDLVKNLRRDLFTLREGAC 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0802 284 SMART finulus 116 165 IPR011598 GO:0046983
Acco07g0802 284 PANTHER BHLH TRANSCRIPTION FACTOR 86 277 - -
Acco07g0802 284 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 110 159 IPR011598 GO:0046983
Acco07g0802 284 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 114 173 IPR036638 GO:0046983
Acco07g0802 284 MobiDBLite consensus disorder prediction 88 109 - -
Acco07g0802 284 Coils Coil 149 183 - -
Acco07g0802 284 Pfam Helix-loop-helix DNA-binding domain 115 160 IPR011598 GO:0046983
Acco07g0802 284 Gene3D - 109 176 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0802 Acco-ChrAcco07 10069961 10073789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0802 81 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 39.908 1.98e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco07g0802 HLH 1.1e-07 No_clan