Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0776 ATGACCGGCGATACTTCGTATTCTGCAGACAACAAGAGCTTGTCGCCGAGTCAAAACCTCGACATCACGATAGAGGAAGGATCTCCAACCAGTGAGCAATTGCTTGATGTTGGGGATGAGTGCAATGATTTTGAAAATGACTGTGGGCAGCTATTTGAGATTGATGGAGATGATCATGAAAATGGGAGAGATGAAACGGATCCTTTTTATTTTCATGATGGGGAATCTCAAGTTAAAAACTACCCTCCACCAGTAGTAGGGATGGAATTTGATACATATGATGATGCCTATAATTACTACAATAGCTATGCCAAGGAACTTGGGTTTGCTATTAGGGTTAAATCATCATGGACCAAACGTAACAGCAAAGAAAAACGTGGTGCTGTGCTCTGCTGCAACTGTGAGGGTTTCAGAACAGTCAAGGAAGCAAATAGTCGTAGGAAAGAAACAAGAACAGGTTGTCTGGCTATGATTAGGTTGAGATTAGTGGAATCTAACAGGTGGAGAGTGGATGAAGTCAAGCTTGAGCATAACCATTCATTTGATCCTGAGAGAGCACAAAACTCTAAATCACACAAGAGGATGGATAGTGGGGCCAAAAGAAAGATTGAGCCAACTTTAGACGTTGAAGTAAGGACAATCAAGTTATACAGAACGCCTGTAAAGGATTCATCAGGTTATAGAAGCTCAAATGCTAATGAAGAAGGAACGAATGACCACACTAATTTTTCCAGGCGTTTAAAACTTAGAGAAGGGGATGCACAAGTTATTGCAAACTACTTCTGCCACAGACAAATGATGAATCCTAATTTTTTCTATGTGATGGACCTGACTGATGATGGGCGTATGAGGAACGTCTTTTGGATTGATTCAAGATCAAGGGCTGCATATGGTTACTTTGGTGATGTGGTTGCAATTGACTCAACATGCTTGTCAAACAATTATGAGATTCCACTGGTCGCATTTGTTGGTGTCAATCACCATGGGCACTCTATTTTATTTGGATGTGGTCTGCTTGCTGATGAGTCATTTGAAACATACATATGGTTATTTAGGGCATGGCTTACATGTATGTCTGGTCGCCCTCCACAAACTATCATTACAAATCAGTGTAAAACCATGCAGAGTGCAATAACTGAGGTTTTCCCAAGAGCCCACCATAGAATTTGTCTTTCACAAGTCATGCAGAGCATCCTAGGAGACTTTGCACTGTCACAAGAATATGATGCATTTCAGATGGCGTTGACGAAAGTGATGTATGAATCTAAAACAGTTGATGAATTTGAGAGGGCTTGGGAGGCTTGGACTCAACATTTTGGAATCAGCAATCATGAGAAGCTCCAAACCCTACATGAAGAACGGGAGTGTTGGGCTCCAGTTTATTCCAAGGACACATTTTTTGCTGGAATTTCTGATTACGTAAAGGATGAGACCACTAGTCCCTTTTTCTATGGTCATGTGCATCAACAAACTTCTTTGAAAGAATTTTTTGACATTTTGGAATCAGTTTTACAAGAGAAGCATAGAAAAGAAGCTCTTGCTGACTTAGAGTCAAGAGATTCAACACCCTTACTGAAAACAAGATCTTACTATGAGTTGCAGCTCTCAAAACTTTACACAAATGCAGTATTCAGCAAATTCCAAGATGAAGTGGTGATGATGTCTTCTTGTCTCAGCATTACAGAATCCCAAACAAATGGGTCGATAGTGACGTACATAGTTAAAGAACATGTAGGGGAGGAATTAGCGAGTGATGTCAGGCAATTCGAAGTCATGTTTGATAAAGCAGGAGCAGAAGTTCGCTGCGGCTGTAACTGCTTTAACTTCAAAGGCTATCTATGCCGGCATGCCTTGTGTATCCTTAATTACAATGGCGTGCAGGAAATTCCATGCCAGTATATTTTGTCAAGATGGAGGAAGGATTATAAGAGATTGTATGTACCAAATCTAAGCTCCAATAATGTTGATATCACCAACCCTGTTCAGTGTTATGATCATTTGTACAGACGGGCTATGCAAGTTGTTGAAGAAGGAATGGTATCACAAGATCATTATATGGTTGCTTGGCAGGCATTTAAAGAGTCATTGAACAAGGTTCGCCTTGTAGCAGCTGATAAGATTGATTAA 2127 0.4048 MTGDTSYSADNKSLSPSQNLDITIEEGSPTSEQLLDVGDECNDFENDCGQLFEIDGDDHENGRDETDPFYFHDGESQVKNYPPPVVGMEFDTYDDAYNYYNSYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFRTVKEANSRRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHSFDPERAQNSKSHKRMDSGAKRKIEPTLDVEVRTIKLYRTPVKDSSGYRSSNANEEGTNDHTNFSRRLKLREGDAQVIANYFCHRQMMNPNFFYVMDLTDDGRMRNVFWIDSRSRAAYGYFGDVVAIDSTCLSNNYEIPLVAFVGVNHHGHSILFGCGLLADESFETYIWLFRAWLTCMSGRPPQTIITNQCKTMQSAITEVFPRAHHRICLSQVMQSILGDFALSQEYDAFQMALTKVMYESKTVDEFERAWEAWTQHFGISNHEKLQTLHEERECWAPVYSKDTFFAGISDYVKDETTSPFFYGHVHQQTSLKEFFDILESVLQEKHRKEALADLESRDSTPLLKTRSYYELQLSKLYTNAVFSKFQDEVVMMSSCLSITESQTNGSIVTYIVKEHVGEELASDVRQFEVMFDKAGAEVRCGCNCFNFKGYLCRHALCILNYNGVQEIPCQYILSRWRKDYKRLYVPNLSSNNVDITNPVQCYDHLYRRAMQVVEEGMVSQDHYMVAWQAFKESLNKVRLVAADKID 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0776 708 ProSiteProfiles Zinc finger SWIM-type profile. 589 625 IPR007527 GO:0008270
Acco07g0776 708 MobiDBLite consensus disorder prediction 1 20 - -
Acco07g0776 708 MobiDBLite consensus disorder prediction 179 201 - -
Acco07g0776 708 MobiDBLite consensus disorder prediction 223 238 - -
Acco07g0776 708 SMART 26again6 600 627 IPR006564 GO:0008270
Acco07g0776 708 MobiDBLite consensus disorder prediction 222 244 - -
Acco07g0776 708 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 76 700 IPR031052 GO:0006355
Acco07g0776 708 Pfam FAR1 DNA-binding domain 98 182 IPR004330 -
Acco07g0776 708 Pfam MULE transposase domain 303 396 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0776 Acco-ChrAcco07 9582832 9585685 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Acco07g0776 MULE 3.4e-27 CL0219