Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0764 ATGGGTATTGCTTTTTGCCCTATATTTTTCTGTGCAAAGGGTTCAGATCGAAAAGAAAGAAGTAAGAAAGTGTCTACATGGAGAGTCTTTTCTTTGAAGGAACTACACTCAGCGACAAATAATTTTAACTATGATAACAAGCTTGGAGAAGGGGGATTTGGCAGTGTATACTGGGGCCATCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTAAAAGTTTGGAGCAACAAAGCAGATATGGAATTTGCTGCTGAAGTTGAGATATTGGCTAGAGTAAGACACAAGAATCTTCTTAGTCTTCGTGGCTATTGTGCTGAAGGGCAGGAAAGACTAATTGTATATGATTATATGCCGAATTTGAGCCTCCTCTCTCATCTTCATAGACAGCACTCTGCAGATTGCCTTCTTGATTGGAACAGACGCATGAATATCGCTCTTGGGTCAGCTGAGGGAATTTCATATCTTCACCACCATGCAACACCCCACATAATCCATAGGGATATCAAATCAAGCAACGTGTTACTGGATGTGAATTTCAAGGCTCAGGTTGCTGATTTTGGTTTCGCTAAGTTGATTCCTGACGGGGCAACCCATGTGACCACAAGAGTTAAGGGAACCCTTGGCTACCTTGCACCAGAATATGCCATGCTTGGCAAGGCATCTGAGAGTTGCGATGTTTATAGTTTTGGGATTCTCTTGCTAGAACTCGCAAGTGGAAAGAGACCAATTGAGAAACTAAGTGCTTCAATGAAGCGATCAATAGCTGACTGGGCACTACCACTGGTTATTGAGAAGAGATTCAGTGAACTTGCAGATCCAAAGCTAAAGGGTAAGTATGTGGAGGAAGAACTCAAAAGAATGGTTCTTGTTGCACTGGTATGTGCTCAAAAACAACCCGAAAAAAGACCCACCATGCTTGAGGTGGTAGAACTGCTTAAGGGAGATTCTAAGGATATGTTATGTGCGTTAGAAAAGAATGAAATTTTCAGACAACTTCCAGCTTTAGAAAACAGTGATGGGGAATCAGCTGCTGAAGATAGTTCATACTTCATATCAGAAGAGAAGGAATCAACATCTGAGATGAAAGAGAGCAGTGGGCAAAATTCATAG 1113 0.4151 MGIAFCPIFFCAKGSDRKERSKKVSTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGHLWDGSQIAVKRLKVWSNKADMEFAAEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHRQHSADCLLDWNRRMNIALGSAEGISYLHHHATPHIIHRDIKSSNVLLDVNFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKRPIEKLSASMKRSIADWALPLVIEKRFSELADPKLKGKYVEEELKRMVLVALVCAQKQPEKRPTMLEVVELLKGDSKDMLCALEKNEIFRQLPALENSDGESAAEDSSYFISEEKESTSEMKESSGQNS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0764 370 SUPERFAMILY Protein kinase-like (PK-like) 22 313 IPR011009 -
Acco07g0764 370 FunFam PTI1-like tyrosine-protein kinase At3g15890 14 117 - -
Acco07g0764 370 FunFam PTI1-like tyrosine-protein kinase At3g15890 118 329 - -
Acco07g0764 370 CDD STKc_IRAK 48 315 - -
Acco07g0764 370 Gene3D Transferase(Phosphotransferase) domain 1 118 329 - -
Acco07g0764 370 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0764 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Acco07g0764 370 Gene3D Phosphorylase Kinase; domain 1 12 117 - -
Acco07g0764 370 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524
Acco07g0764 370 Pfam Protein kinase domain 43 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0764 370 ProSiteProfiles Protein kinase domain profile. 42 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0764 370 PANTHER OS01G0253100 PROTEIN 22 318 - -
Acco07g0764 370 MobiDBLite consensus disorder prediction 335 370 - -
Acco07g0764 370 PIRSF ILK 10 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0764 Acco-ChrAcco07 9488986 9491722 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0764 30 320 Trihelix Transcription Factor Family AT1G70460 50.842 1.69e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Acco07g0764 Pkinase 2.2e-45 CL0016