Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0748 ATGGCAGAAAATCATCTTCATGGGACTCTCCACGCCACCATTCATGAGGTGGATAAGATCGGTAATAGTAGTGGAGATGGCAATATTTTCAGCATGCTGAAGCAAACTATCGAGGACACAGTTGGTGTAGGACAGGGATCATCCAAAATCTACGCAACCATTGATCTGGAGAAAGCAAGAGTGGGAAGAACCAGAGTGTTGGAAAACACAAATTCCAATCTCAGGTGGCAAGAATCTTTCCACATCTACTGTGCCCACGTGGCATCCCACGTCATCTTCACCCTCAAAGGCGTCAACAAGATTGGCGCCACCCTAATCGGCCGAGCCTATGTCCCCGTCGACAGCATCATCGGCGGCGACCCCTACGACGAATGGCTCGACATCTCAAACGAGGACAAAGAACCCTTAGGCTCCAAAATCCACGTCAAGCTCCAATACTTTGACGTCACTAAGGACAGAAACTGGAACCGAGGTATAAGAAGCCCTAAATACCCCGGTGTACCCCACACTTTCTTCTCACAAAGACGAGGTTGTAAGGTAACGTTGTACCAAGACGCTCATGTGCCTGATGATTTTATCCCCAAAATACCACTCTCAGACGGCAATAATTACCAACCTCACCGTTGTTGGGAAGATGTTTTTGACGCTATTTCTAAAGCAAAACACTTCATATACATCACTGGTTGGTCTGTTTACACTGAAATTAAGCTCGTGAGAGATGCTAAGAGGCCTAAAGATGGAGGTCAGGTAACCCTAGGGCAACTTCTGAAGGAGAAAGCAAATGAAGGTGTTAGGGTTTTAATGCTTGTTTGGGACGATAGAACTTCTGTGAGTTTGTTGAAAAAAGATGGGTTAATGGCAACACATGATGAAGAAACTGAGATATTCTTTCAAGGTTCTCAAGTTCACTGTGTTTTGTGTCCCCGTGATCCCGACGAAGGCGCCGGAAGTATAATCCAGGACGTTCAGACCTCCACCATGTTCACCCACCACCAGAAGATCGTGGTGGTGGACAGCGAGATGCCAGGACGGCGGTCGTCGTCGGGGAAGAGAAGGTTAATGAGTTTCGTCGGCGGGCTTGATTTATGCGATGGAAGATACGACACGGCGTTTCATTCGCTTTTCAGAACGTTAGACACGGCTCATCACGATGACTTTCATCAGCCTAACTTCGTCGGCGCGGACATTAACAAAGGCGGTCCGAGAGAACCGTGGCACGACATACATTCTCGCCTAGAAGGGCCCGTTGCTTGGGATGTTTTGTTTAATTTTGAACAGAGATGGAGGAAGCAAGGAGGGAAAGATGTACTCGTGTCACAAGGAGAACTCGAGGATATAGTTATTCCGCCGTCTCCGGTGATGTTCCCGGAGGATCATGAGTCGTGGAACGTCCAGTTATTCCGGTCTATCGATGGCGGGGCCGCCTTTGGGTTCCCGGAAAGCCCGGAAGAAGCGGCCGATGCTGGGTTGGTGAGCGGGAAAAACAACATCGTCGACCGGAGCATTCAGGACGCGTATATTCATGCGATAAGGCGAGCGAGGAAGTTCATTTACATAGAGAATCAGTATTTTCTGGGAAGCTCTTATGCGTGGAGCGGCGAAGATGGCGACATAAAGCCGGAAGAGATTAATGCATTGCATGTGATACCAAAGGAGTTGTCACTGAAGATTGTGAGTAAGATTGAGGCAGGGGAAAGGTTTACGGTGTATGTGGTGGTGCCGATGTGGCCAGAAGGAATACCGGACAGCGGGTCAGTTCAGGCGATATTGGATTGGCAGAGGAGAACGATGGACACTATGTATAAGGACATTGTTGATGCTTTGGAGGCAAAGGGTATTAGGGAAGATCCTCGCAAGTACTTGACATTCTTCTGTCTGGGGAATAGGGAAGCGAAACATGACGGCGAGTATGAACCAACGGAGCAACCAGAACCTGATTCTCCTTATGCAAAAGCTCAGGCAGCTCGTCGCTTCATGATTTATGTTCACACCAAGATGATGATAGTGGATGATGAGTACATAATCGTGGGATCAGCGAACATAAACCAAAGGTCGATGGACGGAGCGAGGGACACAGAGATAGCAATGGGGGGATATCAGCCGTATCATTTGGCGACGAACAAGCGGCCGGCGAGAGGCCAGATCCATGGATTCCGAAAGGCATTATGGTATGAGCATCTTGGGACAATGGATGAGTGCTTCGATAACCCAGAAAGCGAAGAATGTGTGGAGAAGGTGAACCATATGGCTGATAAGTACTGGGAACTTTACGCAGATGAATCCTTTGATGAAGACCTTCCAGGTCACTTGCTGCGTTATCCAGTTAAGATTTCTAGGGAAGGACGAGTGCAACAACTTGGAAACTGTGAATTCTTCCCTGATACTCAGGCTCGTATTCTTGGGGCCAAATCTGACTACATGCCACCAATCCTTACTACTTAA 2442 0.4824 MAENHLHGTLHATIHEVDKIGNSSGDGNIFSMLKQTIEDTVGVGQGSSKIYATIDLEKARVGRTRVLENTNSNLRWQESFHIYCAHVASHVIFTLKGVNKIGATLIGRAYVPVDSIIGGDPYDEWLDISNEDKEPLGSKIHVKLQYFDVTKDRNWNRGIRSPKYPGVPHTFFSQRRGCKVTLYQDAHVPDDFIPKIPLSDGNNYQPHRCWEDVFDAISKAKHFIYITGWSVYTEIKLVRDAKRPKDGGQVTLGQLLKEKANEGVRVLMLVWDDRTSVSLLKKDGLMATHDEETEIFFQGSQVHCVLCPRDPDEGAGSIIQDVQTSTMFTHHQKIVVVDSEMPGRRSSSGKRRLMSFVGGLDLCDGRYDTAFHSLFRTLDTAHHDDFHQPNFVGADINKGGPREPWHDIHSRLEGPVAWDVLFNFEQRWRKQGGKDVLVSQGELEDIVIPPSPVMFPEDHESWNVQLFRSIDGGAAFGFPESPEEAADAGLVSGKNNIVDRSIQDAYIHAIRRARKFIYIENQYFLGSSYAWSGEDGDIKPEEINALHVIPKELSLKIVSKIEAGERFTVYVVVPMWPEGIPDSGSVQAILDWQRRTMDTMYKDIVDALEAKGIREDPRKYLTFFCLGNREAKHDGEYEPTEQPEPDSPYAKAQAARRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDTEIAMGGYQPYHLATNKRPARGQIHGFRKALWYEHLGTMDECFDNPESEECVEKVNHMADKYWELYADESFDEDLPGHLLRYPVKISREGRVQQLGNCEFFPDTQARILGAKSDYMPPILTT 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0748 813 Pfam Phospholipase D Active site motif 326 366 IPR001736 GO:0003824
Acco07g0748 813 Pfam Phospholipase D Active site motif 659 685 IPR001736 GO:0003824
Acco07g0748 813 Pfam C2 domain 37 127 IPR000008 -
Acco07g0748 813 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 366 IPR001736 GO:0003824
Acco07g0748 813 Gene3D Endonuclease Chain A 473 701 - -
Acco07g0748 813 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 658 685 IPR001736 GO:0003824
Acco07g0748 813 SMART pld_4 658 685 IPR001736 GO:0003824
Acco07g0748 813 SMART pld_4 326 366 IPR001736 GO:0003824
Acco07g0748 813 FunFam Phospholipase D delta 200 446 - -
Acco07g0748 813 ProSiteProfiles C2 domain profile. 1 126 IPR000008 -
Acco07g0748 813 FunFam Phospholipase D 469 704 - -
Acco07g0748 813 CDD C2_plant_PLD 5 147 - -
Acco07g0748 813 Pfam Phospholipase D C terminal 731 803 IPR024632 -
Acco07g0748 813 SMART C2_3c 9 125 IPR000008 -
Acco07g0748 813 PIRSF PLD_plant 1 813 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco07g0748 813 SUPERFAMILY Phospholipase D/nuclease 502 743 - -
Acco07g0748 813 SUPERFAMILY Phospholipase D/nuclease 150 438 - -
Acco07g0748 813 Gene3D Endonuclease Chain A 198 445 - -
Acco07g0748 813 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 149 IPR035892 -
Acco07g0748 813 PANTHER PHOSPHOLIPASE D 6 801 IPR015679 -
Acco07g0748 813 Gene3D C2 domain 7 158 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0748 Acco-ChrAcco07 9243414 9246566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0748 1 813 Phospholipase D Gene Family (Wang group) AT1G52570 73.652 0.0 1280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1327 09 28572246 28575559 Acco07g0748 07 9243414 9246566 CCT
Acco07g0748 07 9243414 9246566 Acco09g1327 09 28572246 28575559 ECH
Acco10g1998 10 32601324 32604700 Acco07g0748 07 9243414 9246566 ECH
Acco07g0748 07 9243414 9246566 Acco07g0748 07 9243414 9246566 ECH