Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0747 ATGGTGCAATCAAAGAAGTTCAGAGGTGTCAGACAGCGTCATTGGGGCTCATGGGTTTCCGAGATTCGCCATCCTTTATTGAAAAGAAGGGTGTGGCTAGGGACGTTTGATACTGCAGAAGAAGCAGCACGAGCATACGATGAAGCAGCCATTTTGATGAGTGGTAGAAACGCCAAAACAAACTTCCCAGTGGTGTCAAACAATAATAACAAAAACAATCAAAATCACCATTCATCCTCATCTTCTTCCCCGTCACCTTTTTCTGAAGCTCTCAGTGCAAAGCTTCGGAAGTGCTGTAAATCGCCATCGCCATCTCTCACTTGCTTGAGGCTGGACACAGAGAATTGTCACATCGGAGTGTGGCAGAAGCGAGCAGGGCCTCGCTCTGACTCCAACTGGGTCATGATGGTGGAGCTGGAAAGGAAGAAACTTGAAGGCTCAGAAATGACGACGACGACGACAGAGTCACCAGCGCCGGAGACGGAGACGGAGACAGAGGAAGAGAAGATGAAGCCAGAAGAAGAAGAAGAAGAAGAAGACAACGGTCATGATGACCTGGACGAGGAACAGAAGATGGCGTTGCAGATGATAGAAGAACTGCTTAATCGGAACTGA 615 0.4829 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFDTAEEAARAYDEAAILMSGRNAKTNFPVVSNNNNKNNQNHHSSSSSSPSPFSEALSAKLRKCCKSPSPSLTCLRLDTENCHIGVWQKRAGPRSDSNWVMMVELERKKLEGSEMTTTTTESPAPETETETEEEKMKPEEEEEEEDNGHDDLDEEQKMALQMIEELLNRN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0747 204 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 175 - -
Acco07g0747 204 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Acco07g0747 204 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Acco07g0747 204 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Acco07g0747 204 MobiDBLite consensus disorder prediction 143 204 - -
Acco07g0747 204 MobiDBLite consensus disorder prediction 62 88 - -
Acco07g0747 204 Coils Coil 183 203 - -
Acco07g0747 204 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Acco07g0747 204 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Acco07g0747 204 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Acco07g0747 204 MobiDBLite consensus disorder prediction 167 185 - -
Acco07g0747 204 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Acco07g0747 204 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Acco07g0747 204 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0747 Acco-ChrAcco07 9222840 9224091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0747 1 204 AP2-EREBP Transcription Factor Family AT1G15360 62.085 4.27e-80 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco07g0747 AP2 1.7e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0747 07 9222840 9224091 Acco07g0747 07 9222840 9224091 ECH