Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0680 ATGAGTAGCAATTCGTTGGTGGGCCTGCAAGACCACCTCAAATTGGCGAGGGAATACGCTCTTGAAGGCCTTTATGACACCTCCATAATCTTCTTCGACGGTGCAATTGCTCAGATCAACAAACACTTGAACTCTGTAGATGACCCTTTATTGCGTACAAAATGGATTAATGTAAAGAAAGCTCTTTCTGAGGAAACAGGAGTAGTGAAGCAACTAGAGGCAGAGAGAAAGGCATTCAAAGAAGGCCCTGGTGGTAGTGGAAGACGTCCTTCTTCGCCTCCCATATCAGTTAAATCATCATCATCATCTTCATTTCTGTTTCAACCATTAGATGAGTATCCTACTTCTTCATCAAGTGCGTCAATGGATGACCCTGATGTATGGAGGCCACCTAATAGAGATGCCCCAAGTAGAAGACCCACAAGGTCTGCTCAAATGGCCACTAGGAAGTCATCACAAGATGGGGCTTGGGCTCGAGGTGCTACTTCAAGAGCAGGCACAACTAGCCGTGGTGCAAAAGCTGGTGCTACAAGTAAAGTTAATTCAGGAGCCAGGGCATCGACTACTGGGAAGAAAGGTGCTGGTTCTGCTTCTGGAAAGTCGAGCAAGGGAGATGCAGCTAATGGTGATGCTGAAGATGGTAAGTCAAAGAAAGGACAATATGAGGGTCCTGATTCTGACTTGGCCGCAATGCTTGAAAGGGATGTTTTAGAAAGCACTCCTGGAGTGAGATGGGATGACGTTGCAGGGCTGACTGAAGCCAAAAGGCTTCTAGAAGAAGCTGTTGTGCTTCCCTTATGGATGCCTGAATATTTCCAGGGGATTAGAAGACCATGGAAAGGTGTTCTCATGTTTGGTCCTCCAGGAACTGGGAAGACACTGTTAGCCAAAGCAGTTGCTACTGAATGTGGCACCACATTCTTCAACGTTTCTTCTGCCACTTTAGCTTCGAAGTGGCGTGGAGAGAGTGAGCGTATGGTGCGATGTTTGTTTGATCTTGCAAGAGCATATGCTCCAAGCACAATTTTCATTGATGAGATTGATTCTTTGTGTAATGCTAGGGGGGCATCTGGTGAACATGAATCATCCAGAAGGGTGAAATCTGAACTTCTAGTTCAGGTTGATGGTGTAAGCAATAGTTCCACGAACGAGGATGGTAGCAGGAAAATAGTAATGGTTTTGGCAGCCACCAACTTCCCTTGGGACATAGATGAGGCACTAAGGAGAAGGCTGGAAAAACGTATTTACATTCCCCTTCCTAATTTCGAGAGCCGTAAAGAGCTGATCCGGATTAATTTGAAGACTGTAGAGGTGGCTACTGATGTGAATATAGATGAAGTGGCTCACCGGACGGAGGGCTACAGTGGGGATGATCTGACAAATGTCTGCCGTGACGCTTCCTTGAATGGCATGAGGCGTAAGATAGCGGGAAAGACTCGGGATGAAATAAAGAACATGCCCAAGGATGAGATTTCAAAGGACCCTGTTGCCATGTGCGATTTCGAAGAAGCTTTGGCAAAGGTCCAACGAAGTGTTTCACAGGCTGACATTGAGCGCCATGAGAAATGGTTTGCTGAGTTTGGATCAGCATAA 1593 0.4626 MSSNSLVGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNSVDDPLLRTKWINVKKALSEETGVVKQLEAERKAFKEGPGGSGRRPSSPPISVKSSSSSSFLFQPLDEYPTSSSSASMDDPDVWRPPNRDAPSRRPTRSAQMATRKSSQDGAWARGATSRAGTTSRGAKAGATSKVNSGARASTTGKKGAGSASGKSSKGDAANGDAEDGKSKKGQYEGPDSDLAAMLERDVLESTPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVSNSSTNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVATDVNIDEVAHRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMPKDEISKDPVAMCDFEEALAKVQRSVSQADIERHEKWFAEFGSA 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0680 530 FunFam Katanin p60 ATPase-containing subunit A1 4 80 - -
Acco07g0680 530 FunFam Katanin p60 ATPase-containing subunit A1 420 506 - -
Acco07g0680 530 MobiDBLite consensus disorder prediction 138 196 - -
Acco07g0680 530 MobiDBLite consensus disorder prediction 206 225 - -
Acco07g0680 530 Pfam AAA+ lid domain 441 482 IPR041569 -
Acco07g0680 530 SMART AAA_5 278 421 IPR003593 GO:0016887
Acco07g0680 530 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 7 530 IPR028596 GO:0008017|GO:0008568|GO:0051013
Acco07g0680 530 PANTHER AAA DOMAIN-CONTAINING 25 529 - -
Acco07g0680 530 Pfam ATPase family associated with various cellular activities (AAA) 282 419 IPR003959 GO:0005524|GO:0016887
Acco07g0680 530 Gene3D - 3 80 - -
Acco07g0680 530 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 527 IPR027417 -
Acco07g0680 530 CDD Kp60-NTD 9 75 - -
Acco07g0680 530 MobiDBLite consensus disorder prediction 77 225 - -
Acco07g0680 530 ProSitePatterns AAA-protein family signature. 391 410 IPR003960 GO:0005524|GO:0016887
Acco07g0680 530 Gene3D - 420 506 - -
Acco07g0680 530 MobiDBLite consensus disorder prediction 92 123 - -
Acco07g0680 530 Gene3D - 240 521 IPR027417 -
Acco07g0680 530 FunFam Katanin p60 ATPase-containing subunit A1 240 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0680 Acco-ChrAcco07 8284385 8287753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0680 234 522 Calmodulin-binding Proteins AT3G56690 40.339 2.17e-51 187