Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0678 ATGTCGCCAGAGAGTACTGTCACCGCTCGATCCGCCCAGTCCGACGTCAAGGAGTTGAACCTGAAGGAGACAGAGCTCACCCTCGGCCTTCCCGGCACCAATAATATCACTTCTAGCTCTAAACGTGCCCTCTCGGAAACCACCGTCTTCAGCCCAACGTCGCCGTCAACTAGTAACCCAGCACCTAAGGCACAGGCAGTGGGGTGGCCGCCGGTGAGGGCAAGCCGGAAGAACGCGATGAGGGGCTGCAAGTACGTGAAGGTGGCTGTGGACGGAGCTCCATATCTGAGGAAGGTAGATCTTGAGAAGTATGAGAGCTATGATCAGCTGCTCACGGATTTAGAGGCCATGTTTGGTTCCTTGACAATTCGCAATCATTTGAATGAGAGGAAGAAGATGACGGACCTTGGGAATGGGGCAGAGTTCGTGCCCACGTATGAGGACAAAGACGGTGACTGGATGCTCGTGGGAGATGTACCTTGGAAAATGTTTGTTGAATCCTGCAAAAGAATCAGATTGCTAAAGTCAGAGACCAGTGGCTTAGAAAATTCGAAGAACAGAGTTGAAGTTGAAGGAGAAAACGTGCGGTAA 591 0.5178 MSPESTVTARSAQSDVKELNLKETELTLGLPGTNNITSSSKRALSETTVFSPTSPSTSNPAPKAQAVGWPPVRASRKNAMRGCKYVKVAVDGAPYLRKVDLEKYESYDQLLTDLEAMFGSLTIRNHLNERKKMTDLGNGAEFVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLLKSETSGLENSKNRVEVEGENVR 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0678 196 FunFam Auxin-responsive protein 78 185 - -
Acco07g0678 196 MobiDBLite consensus disorder prediction 29 68 - -
Acco07g0678 196 SUPERFAMILY CAD & PB1 domains 75 173 - -
Acco07g0678 196 Gene3D - 77 187 - -
Acco07g0678 196 ProSiteProfiles PB1 domain profile. 83 176 IPR000270 GO:0005515
Acco07g0678 196 MobiDBLite consensus disorder prediction 29 63 - -
Acco07g0678 196 Pfam AUX/IAA family 54 80 IPR033389 -
Acco07g0678 196 Pfam AUX/IAA family 82 181 IPR033389 -
Acco07g0678 196 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 19 178 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0678 Acco-ChrAcco07 8242013 8243171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0678 87 177 B3 DNA Binding Superfamily AT4G23980 37.363 9.85e-10 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Acco07g0678 AUX_IAA 1.9e-42 CL0072