Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0675 ATGGATGTTACCTCTCTCGGACCAAATAGTAACACCCAAACTGATCAATACCCTTTGCTGATGGAGCAGCCGGAAACCAATAATGGTCATCAGCACGTAATTGACATTACAAGAAGTAGTAATGACTTATCCGGCTCTACTCAAGATGGCCAACATCATGAAATGCATTTGCCTCATTTGGAAGATCAACCATCAGCTGGCACGCCGGTTCCCATGCATCAATCATCTTCATCTTCATCATCCAGGTTAAACTCTACAAATTCCTCATCAAGAAGAGGTGAGGGATATGATCATCACAGAAGAAGCCCACTGAATTCTGGACTATGGATTTCTGTTGAGTTTGTTGTCACTGTGGGTCAGATCGTAGCATCTATTGTTGTCTTGTCAATTTCCAGGAATGAAAATCCCAAAGCTCCTCTTTTTGCATGGATTGTGGGTTATGCATCTGGTTGTGTTGCTACACTTCCCATTCTTTACTGTCGTTATCAAAATCGTAATCAAAGCTCCGGACGAAATTTATCTCAACCATCTCAAGGATCTTCTGGAAGCAATCCTTCAGAACGGACTTCTTATACTGCAATTTCTGTTGCTCATGTTTCAGATGAAGAGGGTAGTCGGACTACAGAATCAACTACAGTAAACACTGGGATTCCTGGAGCATTTAGTTCTAGGTTTAATGGTTTAGTAGACCATTTCAAGATGGCCTTAGATTGCTTCTTTGCAGTTTGGTTTGTCGTGGGCAACGTTTGGATCTTTGGAGGTCACACTTCTCCTTCTGATGCTCCAAAATTATATAGATTATGTATAGTGTTTCTTACCTTCAGCTGCATTGGATATGCTATGCCATTTATACTATGTGCAACAATTTGTTGCTGCCTACCTTGCATAATTTCTGTTTTGGGAATTCGAGAGGACTTTTCTCTTACTCGAGGAGCCACAGTTGAATCTATCAATGCCCTGCCTATATATAAGTTCAGTTTGAAGAAAAACGGAAATAGTGATGATCAGGATGGCAATACAGATATAGATGAAGGCGGGACCTTGGCTGCTGGGACAGAAAAGGAGCGATCCATATCGGGAGAAGATGCTGTTTGTTGCATTTGCTTGGCAAAATATGCAGATGATGATGAGCTTAGGGAGCTACCTTGCTCCCATGTCTTCCATGTTGAGTGTGTGGACAAATGGCTAAAGATAAATGCATCTTGTCCTCTCTGTAAAAGCGAGGTCGGTACAAATGTACTTTCGGCAGAGGAGTCCAGTCAGCAATAG 1269 0.42 MDVTSLGPNSNTQTDQYPLLMEQPETNNGHQHVIDITRSSNDLSGSTQDGQHHEMHLPHLEDQPSAGTPVPMHQSSSSSSSRLNSTNSSSRRGEGYDHHRRSPLNSGLWISVEFVVTVGQIVASIVVLSISRNENPKAPLFAWIVGYASGCVATLPILYCRYQNRNQSSGRNLSQPSQGSSGSNPSERTSYTAISVAHVSDEEGSRTTESTTVNTGIPGAFSSRFNGLVDHFKMALDCFFAVWFVVGNVWIFGGHTSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDFSLTRGATVESINALPIYKFSLKKNGNSDDQDGNTDIDEGGTLAAGTEKERSISGEDAVCCICLAKYADDDELRELPCSHVFHVECVDKWLKINASCPLCKSEVGTNVLSAEESSQQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0675 422 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 345 413 IPR013083 -
Acco07g0675 422 SMART ring_2 365 405 IPR001841 -
Acco07g0675 422 MobiDBLite consensus disorder prediction 168 188 - -
Acco07g0675 422 MobiDBLite consensus disorder prediction 68 91 - -
Acco07g0675 422 ProSiteProfiles Zinc finger RING-type profile. 365 406 IPR001841 -
Acco07g0675 422 SMART ringv_2 364 406 IPR011016 GO:0008270
Acco07g0675 422 Pfam Ring finger domain 365 406 IPR001841 -
Acco07g0675 422 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 21 409 - -
Acco07g0675 422 SUPERFAMILY RING/U-box 359 411 - -
Acco07g0675 422 MobiDBLite consensus disorder prediction 59 102 - -
Acco07g0675 422 FunFam E3 ubiquitin-protein ligase 348 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0675 Acco-ChrAcco07 8174144 8176970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0675 1 410 C3H Transcription Factor Family AT1G80400 56.802 3.17e-162 461