Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0622 ATGTCTTCGCCGTCTCCGGAAACATCTCCGTCTGCCAACTCCACGGCTCCTCCTCCTCCTCCTCCTCCTCCGCCTCCTGATGCCACCACCGCCAATGCCACCCCTCCCTCAACTCAGAGTAATTCCATGTCACCTACCGCCACTCCGGGGCCGGGGTCGGAATCAGACGGAATGTCCAAAGCTACATTAACCGGACTAGTTGTCGGGACTGTATTTGGCTCGCTGCTTATGCTCGTTCTTGTGGGCATTTGCGCTTTTTTCTATAAAAGGAGGAAGCGGAGGAGGATGAGAAAATATGGTTTGGACGATTGTTCTGCTGCTCCTCCATCTCAACCCAAAGCTGATCAGTTTGGTGGTCTGCCCCAGCAATGGGAGAATAACATTCCTCCTCCAACTGATGGTGGCAAGCCAAGTCCACCCCTTGGAGTTCGGATGAATCAGAAAGCATCATCTCATAATGTCGCATCTTCTCCTATGTATGCTACAAGTGGCCCAAGTTTGGAATCTGAGAGACCGTACCATATGCAATCTTCTGCCATTTTTACGTTGGGACTGTCACAAATCTCGTTTACATATGAAGAACTTTCATTTGCCACAAATGGATTCTCAAACTCAAATCTTCTTGGTCAAGGTGGGTTTGGCTATGTCCATAAAGGAGTCCTTCCAAATGGAAAAACTGTTGCAATTAAGCAGCTGAAATCTGGGAGCAGACAGGGGGAGCGTGAATTCCAGGCTGAAGTGGATGTGATTAGCCGAGTCCATCACAGACATCTTGTTTCCTTAGTTGGATTCTGCATTGCTGGAACCCAGAGGATGCTTGTATATGAGTTTGTTCCAAACAATACACTAGAATTCCATTTGCATGGAAAAGATAGAACAGCAATGGACTGGGCAACAAGGATAAAAATTGCTATTGGATCTGCAAAGGGATTGGCATATCTGCATGAGGACTGTCACCCGGGAATTATACATCGAGACATCAAGGCATCTAACATTCTTCTTGATGACAATTTTGAGGCCAAGGTTGCAGATTTTGGACTTGCCAAAATTTCATCAGATGCTGATACCCATGTCTCCACTCGAGTAATGGGAACCTTTGGATACCTGGCTCCAGAATATGCTGCTAGTGGAAAACTCACCGAGAAGTCAGATGTCTTCTCCTTTGGTGTTATGCTTTTGGAGTTGATTACTGGACGAAGACCTGTTGATAAAACCGAGTCTTTTACAGATGACAGTATGGTTGAGTGGGCAAGACCTTTACTTTCTCAAGCCATGGAAAATAGAAACTTCGATGCTCTTGCTGATCCAAGGTTGCAGGAGAGTTACGACTCTGATGAGATGCTTCGAATGATTGCCTGTGCTGCAAATTGTGTGCGCCATTCAGCTAGGCAACGGCCTCGAATGAGTCAGGTGGTTCGGGCTCTAGAAGGCAATATTTCTTTGGATGATCTGAATGAGGGGAACACACCTGGGCACAGCAGAGCATTTAGTTCCTTTGAAATTTCAGGTTATGATACTGGCCAATACAACGAGGACCTAAAGAAGTTCAGGAAGTTGGCATTAGAGCAAGAAACTAGTGAATACAGTGGACCTAGTAGCGATTCTGGTAAACACCAATCTGCCTCAAGCAGTTCAGGCCTGCAAAATGCACCAGAAAAATAA 1662 0.4621 MSSPSPETSPSANSTAPPPPPPPPPPDATTANATPPSTQSNSMSPTATPGPGSESDGMSKATLTGLVVGTVFGSLLMLVLVGICAFFYKRRKRRRMRKYGLDDCSAAPPSQPKADQFGGLPQQWENNIPPPTDGGKPSPPLGVRMNQKASSHNVASSPMYATSGPSLESERPYHMQSSAIFTLGLSQISFTYEELSFATNGFSNSNLLGQGGFGYVHKGVLPNGKTVAIKQLKSGSRQGEREFQAEVDVISRVHHRHLVSLVGFCIAGTQRMLVYEFVPNNTLEFHLHGKDRTAMDWATRIKIAIGSAKGLAYLHEDCHPGIIHRDIKASNILLDDNFEAKVADFGLAKISSDADTHVSTRVMGTFGYLAPEYAASGKLTEKSDVFSFGVMLLELITGRRPVDKTESFTDDSMVEWARPLLSQAMENRNFDALADPRLQESYDSDEMLRMIACAANCVRHSARQRPRMSQVVRALEGNISLDDLNEGNTPGHSRAFSSFEISGYDTGQYNEDLKKFRKLALEQETSEYSGPSSDSGKHQSASSSSGLQNAPEK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0622 553 ProSiteProfiles Protein kinase domain profile. 202 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0622 553 Pfam Protein tyrosine and serine/threonine kinase 205 475 IPR001245 GO:0004672|GO:0006468
Acco07g0622 553 MobiDBLite consensus disorder prediction 32 57 - -
Acco07g0622 553 FunFam Proline-rich receptor-like protein kinase PERK8 174 277 - -
Acco07g0622 553 ProSitePatterns Protein kinases ATP-binding region signature. 208 230 IPR017441 GO:0005524
Acco07g0622 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 322 334 IPR008271 GO:0004672|GO:0006468
Acco07g0622 553 MobiDBLite consensus disorder prediction 525 553 - -
Acco07g0622 553 MobiDBLite consensus disorder prediction 101 168 - -
Acco07g0622 553 MobiDBLite consensus disorder prediction 11 31 - -
Acco07g0622 553 SUPERFAMILY Protein kinase-like (PK-like) 179 475 IPR011009 -
Acco07g0622 553 MobiDBLite consensus disorder prediction 522 553 - -
Acco07g0622 553 MobiDBLite consensus disorder prediction 1 57 - -
Acco07g0622 553 SMART serkin_6 202 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0622 553 MobiDBLite consensus disorder prediction 144 168 - -
Acco07g0622 553 Gene3D Transferase(Phosphotransferase) domain 1 278 488 - -
Acco07g0622 553 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 75 524 IPR047117 -
Acco07g0622 553 FunFam Proline-rich receptor-like protein kinase PERK1 278 486 - -
Acco07g0622 553 Gene3D Phosphorylase Kinase; domain 1 165 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0622 Acco-ChrAcco07 7477227 7481850 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0622 25 552 Trihelix Transcription Factor Family AT1G70460 50.000 1.06e-165 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Acco07g0622 PK_Tyr_Ser-Thr 5.2e-49 CL0016