Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0617 ATGTCAGGAGCTATAAGGGCGTTACAATACTTAGCTCCAGAATATGCATATACCGGGAAACTCTCAGAGAAGGCAGAAGTCTTTTCCTTTGGTGTTGTGCTCTTAGAGTTGATTGCTGGACGGAAACCTGTTCTTCAAACTGGCTCTTTCACAGATGACAGTCTAGTTCAGTGGGCGAGGCCTTTACTATCCGCAGCTTTGGGGAATCGAAATTTTGGGGATGTAGCTGATCCAAGGTTGCAGAACAATTACAACTCTGAAGAGATGTTTCGAATGGCTTCTTGTGCTGCAAATTGCGTGCGTCATTCACCCGACCATCGCCCTCGAATGAGCCAGGTTGGTGATTCAATTGTTGAAATTATATGTCTTTTCAATCTAGCTGTAGTTGACTTAATTGTGAATTGTTAA 408 0.4338 MSGAIRALQYLAPEYAYTGKLSEKAEVFSFGVVLLELIAGRKPVLQTGSFTDDSLVQWARPLLSAALGNRNFGDVADPRLQNNYNSEEMFRMASCAANCVRHSPDHRPRMSQVGDSIVEIICLFNLAVVDLIVNC 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0617 135 Gene3D Transferase(Phosphotransferase) domain 1 1 123 - -
Acco07g0617 135 Pfam Protein tyrosine and serine/threonine kinase 7 114 IPR001245 GO:0004672|GO:0006468
Acco07g0617 135 ProSiteProfiles Protein kinase domain profile. 1 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0617 135 SUPERFAMILY Protein kinase-like (PK-like) 8 115 IPR011009 -
Acco07g0617 135 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 9 115 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0617 Acco-ChrAcco07 7360734 7361392 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0617 10 113 Trihelix Transcription Factor Family AT5G38560 60.577 2.04e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Acco07g0617 PK_Tyr_Ser-Thr 8.8e-08 CL0016