Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0585 ATGGGATCAGAGCATCCATGTGAACTTGGGTTGGCAAATTCACCATCAGGAAGAAGAATGAAACACGGAGATCTTGAATCTGTTCTTCCCACGCCTCTTTTGATTCTTCAGCATGATGTAAAGGATGCGTTCTTTATGGCAATGGGAAAGTACAAGATGGAGTCTCAGGTGAAGCATGCCGTTGTTGTTAAAGTTATGGGTCGTACTGGTTCCAGAGGGCAGGTGACTCAGGTTAGAGTCAAGTTTTTGGATGATCACAACAGGTATATCATGAGGAATGTGAAAGGACCAGTGAGAGAAGGAGACATTCTCACCCTTCTCGAGTCTGAAAGAGAAGCAAGGAGATTGCGCTAG 354 0.4492 MGSEHPCELGLANSPSGRRMKHGDLESVLPTPLLILQHDVKDAFFMAMGKYKMESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDHNRYIMRNVKGPVREGDILTLLESEREARRLR 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0585 117 Gene3D - 51 117 IPR012340 -
Acco07g0585 117 FunFam 40S ribosomal protein S28 50 117 - -
Acco07g0585 117 Hamap 30S ribosomal protein S28e [rps28e]. 48 117 IPR000289 GO:0003735|GO:0005840|GO:0006412
Acco07g0585 117 ProSitePatterns Ribosomal protein S28e signature. 108 116 IPR028626 -
Acco07g0585 117 PANTHER 40S RIBOSOMAL PROTEIN S28 53 117 IPR000289 GO:0003735|GO:0005840|GO:0006412
Acco07g0585 117 MobiDBLite consensus disorder prediction 1 23 - -
Acco07g0585 117 Pfam Ribosomal protein S28e 56 116 IPR000289 GO:0003735|GO:0005840|GO:0006412
Acco07g0585 117 SUPERFAMILY Nucleic acid-binding proteins 53 117 IPR012340 -
Acco07g0585 117 CDD S1_S28E 58 117 IPR000289 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0585 Acco-ChrAcco07 6950273 6954067 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0585 53 117 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 90.769 5.76e-36 115