Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0581 ATGTCAATGTGCTCGCTTTTGACTTGGTTATGCAGGATGGAGTCTCAGGTGAAGCATGCCGTTGTTGTTAAAGTTATGGGTCGTACTGGTTCCAGAGGGCAGGTGACTCAGGTTAGAGTCAAGTTTTTGGATGATCACAACAGGTATATCATGAGGAATGTGAAAGGACCAGTGAGAGAAGGAGACATTCTCACCCTTCTCGAGTCTGAAAGAGAAGCAAGGAGATTGCGCTAG 234 0.4615 MSMCSLLTWLCRMESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDHNRYIMRNVKGPVREGDILTLLESEREARRLR 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0581 77 Hamap 30S ribosomal protein S28e [rps28e]. 13 77 IPR000289 GO:0003735|GO:0005840|GO:0006412
Acco07g0581 77 Pfam Ribosomal protein S28e 16 76 IPR000289 GO:0003735|GO:0005840|GO:0006412
Acco07g0581 77 Gene3D - 11 77 IPR012340 -
Acco07g0581 77 ProSitePatterns Ribosomal protein S28e signature. 68 76 IPR028626 -
Acco07g0581 77 SUPERFAMILY Nucleic acid-binding proteins 13 77 IPR012340 -
Acco07g0581 77 CDD S1_S28E 18 77 IPR000289 GO:0003735|GO:0005840|GO:0006412
Acco07g0581 77 PANTHER 40S RIBOSOMAL PROTEIN S28 13 77 IPR000289 GO:0003735|GO:0005840|GO:0006412
Acco07g0581 77 FunFam 40S ribosomal protein S28 11 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0581 Acco-ChrAcco07 6928968 6929839 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0581 13 77 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 90.769 6.70e-37 116