Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0545 ATGCCGGTACTGCGTAGTGGAGTGCGCAGGGGCCGGGCAGCAGCAAAGAAACCACAGCAGGAGCAGCAACCTAGTCCATTGATCGAGGAGGGTGAAGCAATTGCAACAAGAACAAGGGGGAGGCGGGCAGCAGCGGCGGCGGCAGCTGAGCCTAAGGTTAACAAACAACAGAAGCAGGAGGTGGTCGATGAGAAGGTAGCTGTACCGGTGAAGGAGGACGAGATCAAGGGTCTGAACGAAGCTGTTCGTGTTGGTGAAGCTGCTGCTGGTGGAGCGGAGAGAGAAGAGGTTGGAGAGAAGCAGATGGATGACTACGATAGTGGTGGAGGCCGGAGCAACGATAAGGGCAATGCCGGTGAAGATGAGGGGAGCACCGCTCCGCTTCCTGAGAAGGTTCAAGTTGGCGGTTCCCCTATGTATAAAATTGATAGAAAACTGGGTAAGGGTGGATTTGGACAAGTATATGTTGGTCGACGAATTTCTGGTGTAAATATGAATGAAAGGACTGGACCTGGAGCTGTAGAGGTTGCCCTAAAATTTGAGCATAGAAGTAGTAAAGGATGTAACTATGGACCGCCATATGAGTGGCAAGTGTACAATAATCTTGGTGGAAGTCACGGTGTGCCACGGGTGCACTACAAGGGAAAGCAAGGTGACTATTATATCATGGTTATGGATATGCTGGGACCCAGTTTGTGGGATGTTTGGAATAATAACTCTCATACAATGTCCACTGAAATGGTTGCTTGTATTGCCATTGAAGCAATTTCCATATTGGAAAAGATGCACTCTCGAGGGTATGTGCATGGAGATGTGAAGCCTGAAAATTTTCTGCTCGGTCCTCCTGGAACCTCTGATGAAAAAAAGCTGTTTCTTGTTGATCTTGGATTAGCTACTAGATGGAAGGATATTACAACGGGTATGCATGTGGAATATGACCAACGCCCAGATGTTTTCAGGGGTACAGTTCGCTATGCTAGTGTGCATGCACACTTGGGAAGAACTGGCAGCAGGAGAGATGATCTGGAATCTCTTGCTTACACATTGATTTTCCTTCTTCGAGGTCGTCTCCCTTGGCAGGGGTATCAGGGAGAAAACAAAGGGTTTCTTGTTTGCAAGAAGAAGATGGGAACTTCTCCAGAGAGCCTATGTTGCTTCTGCCCCCTGCCTTTTAGACATTTTGTTGAACATGTGGTTAACTTGAAGTTCGATGAAGATCCTAACTATGCAAAATATATTTCTCTGTTTGATGGCATTGTTGGACCAAATCCAGATATTAGGCCAATTAATACGGAAGGTGCACAAAAGCTCATTGGTCATAAGAGAGGTCGGTTGGCCATGGAAGAAGAGGATGATGAACAACCTAAAAAGAAGACCCGCATGGGTATGCCAGCAACACAATGGATAAGTGTTTACAATGCTCGCCGACCAATGAAACAAAGATATCATTACAATGTGGCTGATGCAAGGCTGTCCCAGCACATCGAGAAAGGAAATGAGGATGGGTTATATATTAGCAGCGTGGCTTCATGTCAGAACCTGTGGGCCCTAATCATGGATGCAGGAACTGGTTTTACTGCCCAGGTTTATGAACTCTCTCCTTATTTTCTCCACAAGGAATGGATAATGGATCAATGGGAAAAAAATTACTATATAAGCGCAATAGCTGGAGCTGCAAATGGGAGTTCGTTAGTAGTGATGTCTAAGGGCACACAGTTTGTACAGCAATCCTACAAAGTGAGTGATTCATTTCCATTTAAGTGGATAAACAAAAAATGGAGGGAGGGCTTTTATGTCACTGCAATGGCCACTGCTGGTAGCAGATGGGCAGTAGTTATGTCTCGTGGTGCAGGATTTTCTGATCAGGTGGTTGAACTAGATTTTCTTTACCCCAGTGAGGGGATTCACAAAAGATGGGATAATGAATATCGTATCACAGCAACCGCAGCAACTTGGGATCAAGCAGCATTTGTCCTCAGTGTGCCAAGGAGGAAACCTCCGGATGAAACGCAGGAAACACTGAGAACTTCGTCTTTTCCCAGTGTACATGTCAAGGAGAAGTGGGCAAAGAACCTCTATATTGCATCTATTTGCTATGGAAGGACAGTTTCTTGA 2115 0.4596 MPVLRSGVRRGRAAAKKPQQEQQPSPLIEEGEAIATRTRGRRAAAAAAAEPKVNKQQKQEVVDEKVAVPVKEDEIKGLNEAVRVGEAAAGGAEREEVGEKQMDDYDSGGGRSNDKGNAGEDEGSTAPLPEKVQVGGSPMYKIDRKLGKGGFGQVYVGRRISGVNMNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNNLGGSHGVPRVHYKGKQGDYYIMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTSDEKKLFLVDLGLATRWKDITTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMGTSPESLCCFCPLPFRHFVEHVVNLKFDEDPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDEQPKKKTRMGMPATQWISVYNARRPMKQRYHYNVADARLSQHIEKGNEDGLYISSVASCQNLWALIMDAGTGFTAQVYELSPYFLHKEWIMDQWEKNYYISAIAGAANGSSLVVMSKGTQFVQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAVVMSRGAGFSDQVVELDFLYPSEGIHKRWDNEYRITATAATWDQAAFVLSVPRRKPPDETQETLRTSSFPSVHVKEKWAKNLYIASICYGRTVS 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0545 704 SUPERFAMILY Protein kinase-like (PK-like) 140 420 IPR011009 -
Acco07g0545 704 FunFam casein kinase 1-like protein HD16 113 460 - -
Acco07g0545 704 MobiDBLite consensus disorder prediction 1 61 - -
Acco07g0545 704 ProSiteProfiles Protein kinase domain profile. 140 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0545 704 ProSitePatterns Protein kinases ATP-binding region signature. 146 179 IPR017441 GO:0005524
Acco07g0545 704 Pfam Protein kinase domain 140 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0545 704 CDD STKc_CK1 139 416 - -
Acco07g0545 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Acco07g0545 704 MobiDBLite consensus disorder prediction 89 118 - -
Acco07g0545 704 SMART serkin_6 140 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0545 704 Gene3D Transferase(Phosphotransferase) domain 1 110 468 - -
Acco07g0545 704 PANTHER CASEIN KINASE-RELATED 134 669 - -
Acco07g0545 704 MobiDBLite consensus disorder prediction 81 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0545 Acco-ChrAcco07 6545813 6550367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0545 235 416 MAP Kinase Kinase Kinase AT5G50180 26.842 2.53e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Acco07g0545 Pkinase 1.5e-15 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0545 07 6545813 6550367 Acco07g0545 07 6545813 6550367 ECH