Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0531 ATGAACAAAAGAAAACCTCAAAAATCATGTTATGAAGTTATATGTCCAAGATTTTTCACACCTTTCAAGCTTTTTGGGTTTCTCTTGTTCTTTTCCTGGGCTCACATATCAAAGTGGAGTTGCTATCGGATGGATGTGAGGTCAAGAAATGAGGAGGTTTCTCCTCAGCTGCTAGATTTGATCCCAAAGGATAAAAAAGATTGGCAAATGAACGAAGAAGGAAGAACCCAAAACAACAAGAAGGACAAGTCTTGTTGTGAGGAGAGAAAACTTGAGCTTAGACTTGGTCCACCTGGTGGTGAAGACTGGTCTCTCCCTCATAATAACAACACCAAAAACAGTGATGAGTCTGTACTTTCTCTTGGTTACTTCTCTTCTCAGCAAACCCAGAAAATCTCTACCTCTCCATGGGCTTCTTCTTCTAAGGCTTCTTCATTTCTTCAGTTCCCTTCATGTAGTCCTCAGAGCATGCCCGAGAAGAAAGCTTTCTCATCATCCTCTTCTGCTAATCCAGCTGTTCCCTCTAATATCTCTCAGAAAAGAACTGCTCCTGGACCAGTAGTGGGTTGGCCTCCAATTCGTTCGTTTAGGAAGAACCTTGCAAGCAACGGCATTTCTAAGACAGCTCATGAGACACAACAGCAGCAGAATGATGTTGCAGACAAGGTTGCTGGGAAGAAACCTGTTGTTGACAACGTTGGTAAAGGTTTGTTTGTGAAGATCAACATGGATGGAGTTCCCATAGGTAGAAAAGTTGACCTTAATGCTTATGACAGCTATGAAAAACTCTCCTCTGCCGTTGATGAACTTTTCAGATGTCTCCTTGCTGCTCAAAGAGATTCCTCTGCTGGAGGAATCAAGAACAAGGAAGAAAATGAAGAAAAAGCTATTACAGGTTTATTGGATGGAAGTGGGGAATATACTCTTGTTTATGAGGATAATGAAGGAGACAGGATGCTCGTCGGGGACGTGCCATGGCACATGTTTGTATCAACTGTGAAGAGGCTGCGTGTGCTGAAGAGTTCTGAGCTTTCTGCTTTTACCCTTGGTAACAAGCAACACAAGACAGCCACTTGA 1077 0.4271 MNKRKPQKSCYEVICPRFFTPFKLFGFLLFFSWAHISKWSCYRMDVRSRNEEVSPQLLDLIPKDKKDWQMNEEGRTQNNKKDKSCCEERKLELRLGPPGGEDWSLPHNNNTKNSDESVLSLGYFSSQQTQKISTSPWASSSKASSFLQFPSCSPQSMPEKKAFSSSSSANPAVPSNISQKRTAPGPVVGWPPIRSFRKNLASNGISKTAHETQQQQNDVADKVAGKKPVVDNVGKGLFVKINMDGVPIGRKVDLNAYDSYEKLSSAVDELFRCLLAAQRDSSAGGIKNKEENEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGNKQHKTAT 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0531 358 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 88 344 IPR003311 GO:0005634|GO:0006355
Acco07g0531 358 SUPERFAMILY CAD & PB1 domains 232 338 - -
Acco07g0531 358 Pfam AUX/IAA family 91 346 IPR033389 -
Acco07g0531 358 MobiDBLite consensus disorder prediction 157 191 - -
Acco07g0531 358 ProSiteProfiles PB1 domain profile. 236 341 IPR000270 GO:0005515
Acco07g0531 358 FunFam Auxin-responsive protein 231 353 - -
Acco07g0531 358 MobiDBLite consensus disorder prediction 157 182 - -
Acco07g0531 358 Gene3D - 231 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0531 Acco-ChrAcco07 6358303 6361799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0531 240 352 B3 DNA Binding Superfamily AT4G23980 34.513 2.74e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Acco07g0531 AUX_IAA 2.1e-73 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0531 07 6358303 6361799 Acco07g0531 07 6358303 6361799 ECH