Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0518 ATGGAGAGATGGAGAGAATGTGGTGAAGAGTCTGGAAGAGTTGAGCTAGAGCCAGAAGTTCATCGTCCCTCAACAGTGAAGGTGTTGGTAATTGAATGCATTCCAGCTGCTTCAGACTACAAATCATTTCTAAATGCCTTCTTTTGGACTTGTCATCCAAGGACTCTCGCCGTTATGCTCACTTCTAAACATTCCATCAAACCACCTCACCGGCCTCCTTTCATTAGCGCGAAGGCGTTTAATATAATGTTGTTGTCAGGGCTCCTACAAGAGAGGAAAGCCGGAAGCGGAACTGCAAAACGACGCAGCTTTGGCTTAAACGCCAAAGGTGACTCGTCACAGGATCTGGAAGCTCTGTGGCCTGGAAAGTGGAAAGCAATTGGATCCCGCGAACTCGTAATGGCAACACCTCCGATGGGGCCACCGGGAAACCCATTGTTCGACGGGGCTGTGCCGCCGCCCCCACAAACTCCGTGGACAGACATGACCGGGATATGCTTTCGTGACCAGCTCTGGCTCAACACTTACCCTCTAGATCGCAACCTAGTGTTCGATTATTTCGCCTTATCCCCCTTCTATGACTGGACCTGCAACAATGAACAGCTTCGCATGCGCTCAATTCACCCTCTTGATTCATCTGTATTGTCGAAAATGACAGGCATAGAGTATATGCTCAGTGAAGTCATGGAACCACACCTTTTTGTTATTCGCAAGCAAAAGAGAGATGGCCCTGAGAAAGTTACACCAATGCTAGCTTATTACGTCTTAGATGGTTCGATATACCAAGCACCACAGCTATGCAATGTTTTTGCTGCTCGAATTGGAAGGGCACTATATCACATACAGAAGGCTTTTAGTACAGCTGCATCAAAGCTGGAGAAGATAGGATATGTTGATTCTGAAAATGAGCCTGCAGTGCCAGAAGCGAAGGCTGGTAAAGAGACAATTGACATAAAGGAAATGATGCGGGTGGATCACATTCTTGCATCCCTTCAGCGTAAGCTACCGCCTGCTCCACCTCCACCACCATTTCCTGAAGGCTACATGCCGCCTCCAACTGCGGAAACTGAGAAAGGCCCTGAAGGTCAAGAAGCAGGGGAGTCGCAAGCTCCTCATATTGATCCTATAATTGATCAAGGACCTGCAAAGAGAATGAAAGTTTGA 1164 0.4785 MERWRECGEESGRVELEPEVHRPSTVKVLVIECIPAASDYKSFLNAFFWTCHPRTLAVMLTSKHSIKPPHRPPFISAKAFNIMLLSGLLQERKAGSGTAKRRSFGLNAKGDSSQDLEALWPGKWKAIGSRELVMATPPMGPPGNPLFDGAVPPPPQTPWTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDSSVLSKMTGIEYMLSEVMEPHLFVIRKQKRDGPEKVTPMLAYYVLDGSIYQAPQLCNVFAARIGRALYHIQKAFSTAASKLEKIGYVDSENEPAVPEAKAGKETIDIKEMMRVDHILASLQRKLPPAPPPPPFPEGYMPPPTAETEKGPEGQEAGESQAPHIDPIIDQGPAKRMKV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0518 387 Gene3D Mediator complex, subunit Med6 159 288 IPR038566 -
Acco07g0518 387 MobiDBLite consensus disorder prediction 333 387 - -
Acco07g0518 387 FunFam Mediator of RNA polymerase II transcription subunit 6 159 288 - -
Acco07g0518 387 Pfam MED6 mediator sub complex component 165 290 IPR007018 GO:0003712|GO:0006357|GO:0016592
Acco07g0518 387 MobiDBLite consensus disorder prediction 334 350 - -
Acco07g0518 387 PANTHER MED-6-RELATED 136 386 IPR007018 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0518 Acco-ChrAcco07 6158517 6165710 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Acco07g0518 Med6 7.1e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0518 07 6158517 6165710 Acco07g0518 07 6158517 6165710 ECH