Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0515 ATGTCGCAGCAAGTAGAACGAAATGAACAACAAAGCGATACGGCTCAGATAGAGACAAGTAGACAATATTCATACAATGATGTCAAAGGAAAGACCAATGACTTCAGCATAATTCTTGGTCGAGGTGGGTTTGGATCAGTTTATTTGGGCTACATTGATAAAACTCCTGTTGCAGTTAAAATGCTCTCCCTATCTTCATGCCAAGGTCATCAGGAATTCCTAGCAGAATTTAAGCTTTTAATGAGAGTTCATCTCAGAAATCTGACTTCCCTTATTGGGTATTGTAATGAAGAAACCAATAAAGGGCTCATATATGAATATATGGCTAATGGTAACCTACAAGACTACCTTTCAGGGTTGGAGTATCTGCATAATGGATGCAAGCCACCTATAATTCATAGAGATATAAAATCTTCAAACATCTTGCTGAATGAAAACTTCAGAGCCAAAATAGCAGATTTTGGTCTATGTAAAATCATCCCAACTGATGGTGGAAGTCATGTGTCAACTGTTGTTGCTGGTACTCCTGGTTATCTACACCCTGAGTAA 549 0.3825 MSQQVERNEQQSDTAQIETSRQYSYNDVKGKTNDFSIILGRGGFGSVYLGYIDKTPVAVKMLSLSSCQGHQEFLAEFKLLMRVHLRNLTSLIGYCNEETNKGLIYEYMANGNLQDYLSGLEYLHNGCKPPIIHRDIKSSNILLNENFRAKIADFGLCKIIPTDGGSHVSTVVAGTPGYLHPE 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0515 182 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Acco07g0515 182 Pfam Protein kinase domain 117 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0515 182 Gene3D Phosphorylase Kinase; domain 1 4 107 - -
Acco07g0515 182 SUPERFAMILY Protein kinase-like (PK-like) 12 182 IPR011009 -
Acco07g0515 182 SMART serkin_6 33 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0515 182 Gene3D Transferase(Phosphotransferase) domain 1 108 182 - -
Acco07g0515 182 ProSiteProfiles Protein kinase domain profile. 33 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0515 182 PANTHER OS07G0107800 PROTEIN-RELATED 19 182 - -
Acco07g0515 182 ProSitePatterns Protein kinases ATP-binding region signature. 39 60 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0515 Acco-ChrAcco07 6144318 6145220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0515 7 182 Receptor kinase-like Gene Family AT1G51850 52.764 1.07e-65 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Acco07g0515 Pkinase 6.1e-15 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0515 07 6144318 6145220 Acco07g0515 07 6144318 6145220 ECH