Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0512 ATGCAAGGTGATAAAAGTAGTTTCCTGGATTATGGCTTGAGTGAAGCTGATCCTGAGGTTTATGATATTATTGGCAAGGAAAAGAATCTCGGCAGTAGAAAAGCCTTGAGCTCATTGCTTCAGAAAATTTTACGTCGAGGGCACAAAAAGCAAATTACATGTGATATCCATGCAAAGATGGCAGATGAAGTTGGTGCGTTTCTTATGATGGATATAGCTCATATGAGCGGACTTGTTGCTGCTGGTATGCTTTCTGATCCCTTTGAATTTTGCGATATTGTGACAACCACAACTCACAAGGTTTTCCTCAAGATATTCCAGTATCGCGCTTTCTGTGAGAGGTCCCAGAGGTGGCATGATATTCTTCAAAAAGATTCTGTGCTTGGCGTCGATCTAGAGTCTGCCATTAACAACGCTGTTTTTCCTGGCCTACAAGGTGGTCCTCATAACCACACAATTGGAAGACAAGCAGTTTGTTTTAAGTATGCTCAATCCCCTGAGTTTAAGTTACCAAAACCAGGTGATAAAAGTGCCCTTGTTCCTGGAGGCATCCGCATTGGATCGCCGGCAATAACAACAATAGGACTAGGAGAGAGAGAGTTTGTTCTAATAGCAGAATTTATTCATGAGGGTGTACAAATAGCATTTGAAGCCAAACGTCTGGCTCCGGGAACAAAGTTCCTTATTCCTCTTGCTTTCTTCCGTGAAGATTCTTGCCTCGGTTGGCTGCAGTCTGTTCTCTCCAAAAGCAAAACAAAATTTTGGAGTCTGCAGAACCTTTCAGTTCTTCTTCTCTTGGCATTGTTTCAACCTTCTTTAACTCATGCAATTCTTGTACAGCCCCAGAATCAATCAGGATTCATAAGTATTGATTGTGGACTTGTACGTGAACCAAGTTACACAGATGAATCTACTTCCATCTATTACACTTCAGATGCAAATTTCATATCCACTGGAATTATCCACAGCATATCATCCAAATATAAGGCACAGACTCTTAAAAGACAGTTCTGGAATGTTAGAAGCTTCCCCGAAGGAACTAGGAACTGCTATACCCTTAATACTCCTCAAGGAAGCAGCAACAAGTACTTAGTGAGGGCCATGTTCCTGTATGGAAACTATGATAGTGAAAATTATCTTCCCAAATTTGATATCTATCTTGGAGCTAAGTGGTGGGGCACAGTGATGTTTCAGAATACATCTGACATAGTGATCAAGGAAATTGTTTATGCTGCTACTTCTGGTTCTGTTCATGTTTGCCTTTTTAACACTAACAATGGTACACCTTTCATATCAGTTTTGGAGCTCAGAGTTCTTCCCAGTGATGCCTATCTTGTTAGCTCTCTGGAGCTCTTGGCTCGGTATGATTTAGGGTTGCAGGATGGTGAATTAGTCAGATTCCCAGATGACACCTATGATCGAATATGGACTTCTTATACCTCAAAAGACTGGAAAGAGATTAATACCTCGCTTCCTATACGCCAAGGATCATCATCAACATCATCATTCAGTTTCATAACCTTACCACCTTCAATTGTCATGAGTAAAGCAGCAACTCCAGCAAATGTCAGAAACAACATGGAATTTCACTTCCAACCGAGGTACAATGCCTCTTCATACTACACATACTACTACTTCGCCGAGATACAGAAACTCGAAGAAAATCAGATCAGAGAATTCAATGGTTTCTTGAATGGAGAGCTTATCAGTTCTAATCCAATCAGTCCTTCATACCTTGAGACCACAAATTATATAAGTGTAACAACTGAACCTAGGTTCAATATTTGGATCAATAAAACTGGGAGATCAACTCTTCCTCCTATTTTTAATGCCATTGAGATATATATGGTTAAGGATCTCTCTCAATCACAAACACAGCAAACAGATGTTGATGCTATCATGAACATCAAATCATTTTATGGGATCAAGAGAAACTGGCAAGGAGACCCTTGTACTCCACGTGCATACTTGTGGGATGGTCTTAACTGCAGCTATGGTGGATCTGGCCCACCAAGGATCACATCCTTGAATTTATCCTCTGGTGGATTAACTGGAAACATGGCTCCAGACATATCCAATTTGAAGTCGATCGAGTATTTGGATTTGTCAAACAACAATTTAGTTGGAGATGTGCCTAGTTTCCTGTCTCAACTGCAGTTCTTGAGGGTTCTAAACCTAGAAGGCAATCAGCTATCAGGAACAATTCCAACAGAACTTACTGAGATGTCAAAGAATGGATCACTCAAACTCAGTTTTGGTGGAAATCCAAATCTCTGCTCTCGAGAAGATTCATGTAAGAGTAGGAAGGCAAAAGTTGTCATTCCCATAGTATCATCACTAGTAGGAGCTTTCATACTGCTGGCAGCCACAATTACATTCTGCATCTTCAAAAGAAAACAGACAGGCTCCATCTTTCTAGAGAAGCTGAATGCTTATTCCAGTATCAATAAGGAACTAGAGCTAGAGAAACAACAATTCACATATGCTGAAGTTTCTAGAATTACCAAAAACTTTGAAAAGGTTGTGGGAAAAGGAGCATTTGGAACAGTCTACCATGGCTTCATAAACGACACCCAGGTTGCTGTCAAAGTGCTCTCTCCTTCAGCCCAAGGATATCTGCAATTTCAGGCAGAGGCAAAACTTCTGGCTAGAGTTCACCATAAACGTTTGATTGCTCTGATTGGATATTGTGATGATGGCTCCAATATAGCCCTAATCTATGAGTACATGGCTAATGGTGACTTAGCTAAGCATTTATCAGAAAAAATTGAGAATATCTTGGATTGGAAACAACGACTACAAATTGCAGTGGATGCTGCAGAAGGCTTGGATTATCTGCATACGGGTTGTAGGCCACCAATTGTACATAGAGATGTCAAATCCAAAAATATCTTACTAAATGAAAGCTTTCGGGGGAAAATAGCTGATTTTGGATTGTCAAAAGTCTTTCCCAATGAAGGTGATACACATATGTCTACTGTGATAGCTGGCACCCCAGGATACCTTGACCCTGAGTACAATATTTCAAATAGATTGAATGAAAAAAGTGACGTCTACAGCTATGGAATTGTTCTGCTTGAGATAATTACGGGACAAGGTGCCATTATCAAGGATGAAGAGAAAACTCACATAATCCGATGGGTTAAAAATCTCATGCTTGTTGAAAGCAAGATAAGGATTGATGATATTGTGGATTCAAGATTAAAGGGAAACTTTGATACTGATTCTGCAACAAAAGCTTTGGATATTGCAATGGCTTGTGTGGAAGATTCTTCCATGAATAGGCCAACAATGAGTCAAGTAATGATGGAATTGAGACAATGTATGGCTATGGAGACATATCGTGGTTTTTCATTTGGTGGAATTAGTGGAGAGAGTTCTCTGGCCAGATAG 3393 0.4014 MQGDKSSFLDYGLSEADPEVYDIIGKEKNLGSRKALSSLLQKILRRGHKKQITCDIHAKMADEVGAFLMMDIAHMSGLVAAGMLSDPFEFCDIVTTTTHKVFLKIFQYRAFCERSQRWHDILQKDSVLGVDLESAINNAVFPGLQGGPHNHTIGRQAVCFKYAQSPEFKLPKPGDKSALVPGGIRIGSPAITTIGLGEREFVLIAEFIHEGVQIAFEAKRLAPGTKFLIPLAFFREDSCLGWLQSVLSKSKTKFWSLQNLSVLLLLALFQPSLTHAILVQPQNQSGFISIDCGLVREPSYTDESTSIYYTSDANFISTGIIHSISSKYKAQTLKRQFWNVRSFPEGTRNCYTLNTPQGSSNKYLVRAMFLYGNYDSENYLPKFDIYLGAKWWGTVMFQNTSDIVIKEIVYAATSGSVHVCLFNTNNGTPFISVLELRVLPSDAYLVSSLELLARYDLGLQDGELVRFPDDTYDRIWTSYTSKDWKEINTSLPIRQGSSSTSSFSFITLPPSIVMSKAATPANVRNNMEFHFQPRYNASSYYTYYYFAEIQKLEENQIREFNGFLNGELISSNPISPSYLETTNYISVTTEPRFNIWINKTGRSTLPPIFNAIEIYMVKDLSQSQTQQTDVDAIMNIKSFYGIKRNWQGDPCTPRAYLWDGLNCSYGGSGPPRITSLNLSSGGLTGNMAPDISNLKSIEYLDLSNNNLVGDVPSFLSQLQFLRVLNLEGNQLSGTIPTELTEMSKNGSLKLSFGGNPNLCSREDSCKSRKAKVVIPIVSSLVGAFILLAATITFCIFKRKQTGSIFLEKLNAYSSINKELELEKQQFTYAEVSRITKNFEKVVGKGAFGTVYHGFINDTQVAVKVLSPSAQGYLQFQAEAKLLARVHHKRLIALIGYCDDGSNIALIYEYMANGDLAKHLSEKIENILDWKQRLQIAVDAAEGLDYLHTGCRPPIVHRDVKSKNILLNESFRGKIADFGLSKVFPNEGDTHMSTVIAGTPGYLDPEYNISNRLNEKSDVYSYGIVLLEIITGQGAIIKDEEKTHIIRWVKNLMLVESKIRIDDIVDSRLKGNFDTDSATKALDIAMACVEDSSMNRPTMSQVMMELRQCMAMETYRGFSFGGISGESSLAR 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0512 1130 Pfam Protein tyrosine and serine/threonine kinase 838 1104 IPR001245 GO:0004672|GO:0006468
Acco07g0512 1130 Pfam Malectin-like domain 290 617 IPR024788 -
Acco07g0512 1130 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 910 1116 - -
Acco07g0512 1130 ProSitePatterns Protein kinases ATP-binding region signature. 842 863 IPR017441 GO:0005524
Acco07g0512 1130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 954 966 IPR008271 GO:0004672|GO:0006468
Acco07g0512 1130 CDD STKc_IRAK 842 1105 - -
Acco07g0512 1130 Gene3D Phosphorylase Kinase; domain 1 818 909 - -
Acco07g0512 1130 SMART serkin_6 836 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0512 1130 SUPERFAMILY Protein kinase-like (PK-like) 821 1105 IPR011009 -
Acco07g0512 1130 Gene3D Ribonuclease Inhibitor 630 752 IPR032675 -
Acco07g0512 1130 Gene3D - 50 169 IPR015421 GO:0003824
Acco07g0512 1130 ProSiteProfiles Protein kinase domain profile. 836 1114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0512 1130 Pfam Serine hydroxymethyltransferase 58 169 IPR039429 -
Acco07g0512 1130 SUPERFAMILY PLP-dependent transferases 52 232 IPR015424 -
Acco07g0512 1130 PANTHER OS07G0107800 PROTEIN-RELATED 288 1109 - -
Acco07g0512 1130 Gene3D Aspartate Aminotransferase, domain 1 170 237 IPR015422 GO:0003824
Acco07g0512 1130 FunFam Leucine-rich repeat receptor-like kinase 628 761 - -
Acco07g0512 1130 Gene3D Transferase(Phosphotransferase) domain 1 910 1116 - -
Acco07g0512 1130 SUPERFAMILY L domain-like 631 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0512 Acco-ChrAcco07 6087264 6099035 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0512 260 1128 Receptor kinase-like Gene Family AT2G19210 46.145 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco07g0512 Malectin_like 2e-98 CL0202