Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0509 ATGGAGGGTCTAAGTTGGGATGCCTCACAAGCTGTGGAGAACCTACCTATATTGTGGAGCGATATAGAAGAAGAACAAGAGCTTGAAGCAACCTTGAATCCAAGCTTTCCTAATAATCCAATGCAAGAGATACAAAAGCAGCCTCTAACAGGTCATCATCATCATCAAAATCTATATGCAAATTCTGGAAAAGGGTTGATCAAAGAGATGATGGTTCAATTATCAGAAGCAGAAGCAGAATTAGGAGCAGCAGCTACTAGCAGTTCAGAGACAAATCTGTCACAGCTATTAGGTGGGTCCAGCTGGGCAGCTACTGGTGGTGGATCTTACAGTATGAATAACCCATTTGGTAATTTTGATCCTCCAGAGGAATTCAACATGGCCCACCAACAACCTATTGTTGTGAATAATGGCTCACAAAATGGTACCACCACCACCTTCTCTGCTGAGTCACTAGATTGCTTGTTCTCAACTACAAATAGCAACACAGACACATCAGTTGAAGATGATGGAGTAGTCTCCATGACCTTACCAAATTGCAGCAGAAGATCAAACTTATTATGGAGCTACAGTTATAACAACAATGGAGGAGGTGAATCTGAGAGTACTACTAATAATGCTGATCATGAAAAATTATCTCAGGGTTCCTCAGATCTTTATGCAAATCAAGGAATAAAAATTGCAGAATCCACCAATAAGTGTTCAAAAAGGAGACTTGATGATGCTTTTGATCAATATCCCTATTTTAGTATTGAAGAAGGTGGTGGTTCAAGTTCATTCAGGCTCATTGAGGAGAAGAAGAAGAACAACAACGACAATAATCAACCAAATCCCAAAAGACCCAGATGGGATTCTAAGTTTCCAACTTCTTCAAACATCAATTTCAAGCAGCCACATTCATCATCAACAACAACATCATCTTCCATGGAAGAACCAGACCCAGATGCCATAGCACAGATGAAAGAGATGATATACAGGGCCGCAGCATTTAGGCCGGTGAATTTAGGGATGGAAGTTGTGGAGAAGCCGAAGAGGAAGAATGTGAAGATATCAGCAGATCCTCAAACTGTGGCTGCAAGGCACCGAAGGGAGAGAATAAGCGAGAGAATTAGGGTTTTGCAGAAATTGGTTCCTGGTGGAACCAAGATGGACACTGCTTCAATGCTTGATGAAGCTGCAAATTACCTCAAGTTTTTAAGATCACAAGTGAAAGCACTAGAGAGTCTAGGAAACAAAGTTGAGGCTATGAATTGTCCTCCCACTAATATTGCCTTCTCTTTTAACCCTTCTTTTCCCATGCAGTTTAACCCTAATAGCTACAACATCCAACACTGA 1335 0.4105 MEGLSWDASQAVENLPILWSDIEEEQELEATLNPSFPNNPMQEIQKQPLTGHHHHQNLYANSGKGLIKEMMVQLSEAEAELGAAATSSSETNLSQLLGGSSWAATGGGSYSMNNPFGNFDPPEEFNMAHQQPIVVNNGSQNGTTTTFSAESLDCLFSTTNSNTDTSVEDDGVVSMTLPNCSRRSNLLWSYSYNNNGGGESESTTNNADHEKLSQGSSDLYANQGIKIAESTNKCSKRRLDDAFDQYPYFSIEEGGGSSSFRLIEEKKKNNNDNNQPNPKRPRWDSKFPTSSNINFKQPHSSSTTTSSSMEEPDPDAIAQMKEMIYRAAAFRPVNLGMEVVEKPKRKNVKISADPQTVAARHRRERISERIRVLQKLVPGGTKMDTASMLDEAANYLKFLRSQVKALESLGNKVEAMNCPPTNIAFSFNPSFPMQFNPNSYNIQH 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0509 444 MobiDBLite consensus disorder prediction 267 312 - -
Acco07g0509 444 FunFam BHLH transcription factor 353 417 - -
Acco07g0509 444 Coils Coil 389 409 - -
Acco07g0509 444 SMART finulus 356 405 IPR011598 GO:0046983
Acco07g0509 444 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 164 437 IPR045843 GO:0003700|GO:0006355
Acco07g0509 444 Pfam Helix-loop-helix DNA-binding domain 360 399 IPR011598 GO:0046983
Acco07g0509 444 Gene3D - 355 418 IPR036638 GO:0046983
Acco07g0509 444 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 356 412 IPR036638 GO:0046983
Acco07g0509 444 MobiDBLite consensus disorder prediction 274 312 - -
Acco07g0509 444 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 350 399 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0509 Acco-ChrAcco07 6045796 6047130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0509 151 443 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 46.885 5.59e-71 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco07g0509 HLH 1.5e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1540 09 31531907 31532944 Acco07g0509 07 6045796 6047130 CCT
Acco07g0509 07 6045796 6047130 Acco07g0509 07 6045796 6047130 ECH