Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0498 ATGGATTTGGGGATTAGGGTGAGAACACGATATTTGGGTTATTCGAAGAAGCGAAAGAACGTCGCTCAATCTGCCCCCTCCCGCTTCAAAGCCTCCGACGAGCGAAAGCTAAAAAGGTTCGTTTCTGAGTGTCCGGAGAAGATGGCCACTGTACCAGGACAGCTCGTGTGGGAAATTGTGAAGAAGAACAATTGTTTTTTGGTGAGCGAGTTTGGTAGGGGGACTCAGAGCGTGCAGTTCAGTAAAGAGAGCAACAATCTCTACAACCTTAACTCTTTCAAGTTTTCTGGTTTGGCAAACAAGAAAACTATTACAATTCAGCCTGCTGGCAAAGATCAATCTGTGCTTCTGGCAACGACCAAGACAAAGAAGCAGAACAAGCCGGCTGCATTGCTTCATAAATCTGTCATGAAAAAGGAGTTAAGAATGATGGCAAAGGCTGTAGAGAACCAGGTGGCAGATAACTACTACAGGCCTGATCTTAAGAAGGCAGCCCTTGCAAGGTTGAGTGCCATTCATAGGAGCCTCAAAGTTGCCAAGTCTGGTGTTAAAAAGAAGAACAGACAGGCTGTGAGGGTTTCTGGTAGGAAATGA 594 0.4579 MDLGIRVRTRYLGYSKKRKNVAQSAPSRFKASDERKLKRFVSECPEKMATVPGQLVWEIVKKNNCFLVSEFGRGTQSVQFSKESNNLYNLNSFKFSGLANKKTITIQPAGKDQSVLLATTKTKKQNKPAALLHKSVMKKELRMMAKAVENQVADNYYRPDLKKAALARLSAIHRSLKVAKSGVKKKNRQAVRVSGRK 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0498 197 Pfam Ribosomal L28e protein family 55 175 IPR029004 -
Acco07g0498 197 Gene3D - 53 180 - -
Acco07g0498 197 PANTHER 60S RIBOSOMAL PROTEIN L28 48 197 IPR002672 GO:0003735|GO:0005840|GO:0006412
Acco07g0498 197 FunFam 60S ribosomal protein L28 52 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0498 Acco-ChrAcco07 5977124 5980503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0498 48 190 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 73.427 2.35e-75 221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1549 09 31624107 31628909 Acco07g0498 07 5977124 5980503 CCT
Acco07g0498 07 5977124 5980503 Acco09g1549 09 31624107 31628909 ECH
Acco07g0498 07 5977124 5980503 Acco07g0498 07 5977124 5980503 ECH