Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0493 ATGCAAGACCCAATGGCATTTCAGCCGATGAAACCCCAATTTCCTGAACAAGAACAGCTTAAATGTCCGCGTTGTGATTCTGCTAACACCAAATTCTGCTACTATAACAACTATAATCTCTCCCAGCCACGCCATTTTTGCAAGAATTGCAGAAGGTATTGGACCAAAGGCGGTGCTCTTCGAAACATACCAGTCGGTGGTGGAAGCAGGAAGAACACGAAACGATCGTCGTCGTCGACCACCACCAAACGTCCTCCGGCCTCTTCTTCTACTTCAACATCACCTTCTCCTGCATCGGTTTCGGTTTCCTCAACAGCTCGTCCGGATCCTGACCCGACCCGGTTTTATGCCAACCCGATTGGTCCCATGAGCACTGGTGGCAGTTTCAGTTCCCTTCTGGCGTCAACTGTGCATTGGGGTGGTTTTTGGGAGAACGGGTCTGGTTTGAGAATGATGCAACTGAATGAATTTGGGGAGAATGTGGGTTCTGGTCATGTGAAGAACTCGGATTCGGGTGGAAACCAAGGGCTGGAAAGGCAGAGCAATGGTAATTCAGAGAGCTTTGTGGGTAAGCAAAATGTTGAATTAAGCTGTTGGAATGGTAGTAGCAATGGGTGGTCTGATCTTGCAATATATACACCAGGCTCAAGCTACCAGTAG 660 0.4848 MQDPMAFQPMKPQFPEQEQLKCPRCDSANTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKRSSSSTTTKRPPASSSTSTSPSPASVSVSSTARPDPDPTRFYANPIGPMSTGGSFSSLLASTVHWGGFWENGSGLRMMQLNEFGENVGSGHVKNSDSGGNQGLERQSNGNSESFVGKQNVELSCWNGSSNGWSDLAIYTPGSSYQ 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0493 219 MobiDBLite consensus disorder prediction 61 119 - -
Acco07g0493 219 MobiDBLite consensus disorder prediction 161 188 - -
Acco07g0493 219 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Acco07g0493 219 MobiDBLite consensus disorder prediction 162 188 - -
Acco07g0493 219 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Acco07g0493 219 MobiDBLite consensus disorder prediction 69 108 - -
Acco07g0493 219 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Acco07g0493 219 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 165 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0493 Acco-ChrAcco07 5944625 5945284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0493 11 170 C2C2-Dof Transcription Factor Family AT1G51700 54.878 1.16e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco07g0493 zf-Dof 2.9e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1554 09 31682458 31683057 Acco07g0493 07 5944625 5945284 CCT
Acco07g0493 07 5944625 5945284 Acco07g0493 07 5944625 5945284 ECH