Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0485 ATGGAGACAAAACTTGCGCTCCTCCATGGAACGATTGAAGCGACCATCTTCAATGCCACTCCTTATGCATTTGCATTTCCCTTCAATTGTATCAATGCAAAAGGGAAACCTGCATATGTGACCATCAAGCTAGGAAACAAGAAGGTAGCAAAGACAAGTCAAGAACGGGATCGCGTGTGGAATCAAACCTTTCAGATTCAATGTGCTCACCCAGCAGATTCAATCATCATCATAACATTGAAAACATCATGCTCCATATTGGGGAGATTCCATATTCAGGCTCACAAGTTACTGAAGGAAGAGAGTTTAATCAATGGTTTCTTCCCTCTCCACATGGAAAATGGAAAACCGAATCCTCAACTCAAATTAAGGTTTTTATTGTGGTTCAAACCAGCAGGGCTTGAACCAAGTTGGGAAAAGCTTCTAAGGAATGGGGAATTTCATGGCTTAAGGGATGCTTCGTTTCCACAAAGGTCTAATTGTGAGGTTAAGCTTTACCATGATGCTCACCATTCTTTTACTTATCAACCTCCTTTTGATCATTGCGGAGCTCCAAGAAGGCTATGGGAAGATGTATATAAAGCTATTGATGGTGCAAAGTACTTAGTTTATATTACAGGATGGTCCTTTAATCCACAGATAGTTCTGGTCAGAGATCCAGAAACAGAAATCCCACAAGCAAGAGGAATAAAGCTTGGGGAGCTGTTAAAAAGGAAAGCAGAAGAAGGAGTAGCAGTGAGAGTTATGGTTTGGGATGATGAAACATCTTTGCCATTTATAAAGAACAAAGGTATGATGAATACCCATGATGAGGATGCTTTTGCATACTTCAGACACACAAAAGTTATATGCAGAAAGTGTCCAAGATTACACCATAAGTTCCCTACATGGTTCACTCACCACCAGAAGACTATAACTGTTGATGCCAAAGCACCGACGAAATCTGTGAATGATAGAGAAATTATGAGCTTCATTGGTGGGTTAGATTTGTGTGATGGCAGATACGACACGGAGCAGCATTCTTTGTTTCAAACGCTAAAGAGCGAATCACATTACAATGATTTCTATCAGACAAATATTGCAGGTGCTTGCCTTAATAAAGGAGGGCCAAGAGCACCTTGGCATGATGCTCATGCTTGTGTTATAGGTGGTGCTGCTTGGGACGTGTTAACAAATTTTGAGCAAAGATGGACAAAGCAATGTGATCCTTCCCTTTTAGTCCCTGCAAGTTCCCTAGCAAAACTCTTGCCCCAAACACTTCCAAGCATACCTACAGAGAGGAATTGGAAAGTTCAAGTATATAGATCAATTGACCATATCTCTGCTTACCAATTGTCCAGAAAGCTCACTGTCGAAAGGAGCATCCATGATGCTTATGTTGAAGCAATCAGGCGCGCCGATAGGTTTATATACGTAGAAAACCAGTATTTCATAGGAGGATGCGAGTTGTGGGACAAAGAGAAGCATAGTGGATGCAGAAATTTGATTCCTATTGAGATAGCACTTAAAGTGGTGAGTAAGATTAAAGCAAAAGAGAGATTTTCAGTGTATGTAGTGATTCCAATGTGGCCAGAAGGAATACCAGAAAGTGAAACAGTTCAGGACATTTTGTATTGGACAAGAGAAACAATTAGAATGATGTATAGGTTGATTGGAGAAGCAATACAAGAAAGTGGGGAAGCAGGGCACCCAAGAGATTATTTGAATTTCTTTTGTTTAGCAAATAGGGAAAAGAAGGAAGAAGGAGAGTACATGCCACCACATTGTCCTCGTGCTGAAACACAATATTGGAACGCACAAAAGAGTAGAAGGTTCATGGTGTATGTCCACTCCAAGCTCATGATAGTGGACGACATGTACTTGTTGATAGGGTCAGCCAATGTGAACCAGAGATCCATGGATGGTGAAAGAGACACAGAGATAGCCATAGGATGCTACCAACCACAAGATGTGGATTCCAACAACCAAGCGATGAATCGCGGCGAGATTCATGCATACAGGAAGTCACTATGGTACGAACACAGTAAGTGTGAAGAGGTAAGGTTGATGCAGGAGCCAGAGAGTTTGGAGTGTGTTCGGAAAATGCGATCGATCGGAGATCGAATGTGGGAAATCTACAGCGGCGAAGAAGTTGTGGACATGGAAGGCGTTCATCTAGTGAGCTACCCTTTGAAGGTGACGCAACAAGGTTTGGTATTAGAAGTGAAAGAGTGTGATGGTTGTTTTCCAGATACACAATGCCCAGTGAAGGGCAAGAGATCCAAGGTGTTGCCTCCTATCTCCACTACTTAG 2292 0.4197 METKLALLHGTIEATIFNATPYAFAFPFNCINAKGKPAYVTIKLGNKKVAKTSQERDRVWNQTFQIQCAHPADSIIIITLKTSCSILGRFHIQAHKLLKEESLINGFFPLHMENGKPNPQLKLRFLLWFKPAGLEPSWEKLLRNGEFHGLRDASFPQRSNCEVKLYHDAHHSFTYQPPFDHCGAPRRLWEDVYKAIDGAKYLVYITGWSFNPQIVLVRDPETEIPQARGIKLGELLKRKAEEGVAVRVMVWDDETSLPFIKNKGMMNTHDEDAFAYFRHTKVICRKCPRLHHKFPTWFTHHQKTITVDAKAPTKSVNDREIMSFIGGLDLCDGRYDTEQHSLFQTLKSESHYNDFYQTNIAGACLNKGGPRAPWHDAHACVIGGAAWDVLTNFEQRWTKQCDPSLLVPASSLAKLLPQTLPSIPTERNWKVQVYRSIDHISAYQLSRKLTVERSIHDAYVEAIRRADRFIYVENQYFIGGCELWDKEKHSGCRNLIPIEIALKVVSKIKAKERFSVYVVIPMWPEGIPESETVQDILYWTRETIRMMYRLIGEAIQESGEAGHPRDYLNFFCLANREKKEEGEYMPPHCPRAETQYWNAQKSRRFMVYVHSKLMIVDDMYLLIGSANVNQRSMDGERDTEIAIGCYQPQDVDSNNQAMNRGEIHAYRKSLWYEHSKCEEVRLMQEPESLECVRKMRSIGDRMWEIYSGEEVVDMEGVHLVSYPLKVTQQGLVLEVKECDGCFPDTQCPVKGKRSKVLPPISTT 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0485 763 SUPERFAMILY Phospholipase D/nuclease 142 423 - -
Acco07g0485 763 Pfam PLD-like domain 606 654 IPR025202 -
Acco07g0485 763 PIRSF PLD_plant 3 763 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco07g0485 763 Pfam C2 domain 38 109 IPR000008 -
Acco07g0485 763 Pfam Phospholipase D C terminal 683 752 IPR024632 -
Acco07g0485 763 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 131 IPR035892 -
Acco07g0485 763 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 296 334 IPR001736 GO:0003824
Acco07g0485 763 Gene3D C2 domain 31 129 IPR035892 -
Acco07g0485 763 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 605 632 IPR001736 GO:0003824
Acco07g0485 763 SUPERFAMILY Phospholipase D/nuclease 422 652 - -
Acco07g0485 763 Gene3D Endonuclease Chain A 170 419 - -
Acco07g0485 763 PANTHER PHOSPHOLIPASE D 3 745 IPR015679 -
Acco07g0485 763 SMART pld_4 605 632 IPR001736 GO:0003824
Acco07g0485 763 SMART pld_4 296 334 IPR001736 GO:0003824
Acco07g0485 763 Pfam Phospholipase D Active site motif 298 334 IPR001736 GO:0003824
Acco07g0485 763 CDD PLDc_pPLD_like_2 447 649 - -
Acco07g0485 763 Gene3D Endonuclease Chain A 420 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0485 Acco-ChrAcco07 5849144 5853572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0485 30 763 Phospholipase D Gene Family (Wang group) AT1G55180 63.392 0.0 980
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0485 07 5849144 5853572 Acco07g0485 07 5849144 5853572 ECH