Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0463 ATGTATCGAGCAGCTTCCAAACTAGCTTCCTCTTTTAGCTCCTCCTCTTCCAGAAAGCTTGTACATAATCGGATAATATCCAACAGAAATTATGTGGCTAAGGATATTAACTTCGGAATTGGAGCTCGCGCTGCTATGCTTCAAGGAGTTTCTGAGGTTGCAGCAGCTGTAAAAGTAACAATGGGACCTAAGGGTCGCAATGTAATCATTGAGAAAAGTCATGGAAAACTCAAGATTACAAAGGATGGAGTGACCGTTGCCAGAAGTGTCAATTTTGAAGACAAGGCCAAAAATCTTGGTGCTGAGCTTGTGAAGCAGGTTGCTAAGGCTACCAATACTGCCGCTGGCGATGGTACAACTTGTGCAACTGTTCTTACTCAGGCTATACTCATAGAAGGTTGCAAAGCTATTGCTTCTGGTGTAAATGTTATGGATTTGAGAAACGGTATAAATAAGGCTGTTGATGCTGTAATTACTGATTTGAAAAGCAGAGCATTAATGATTAGCACACAAGAAGAGATAACCCAGGTTGGAACTATATCTGCTAATGGAGAGCGTGATATTGGAGAACTTATTGCAAGAGCAATGGAGAAAGTTGGAAAGGAGGGAGTCATTACTGTTGCTGATGGGAACACTTTGCATAATGAGTTGGAAGTGGTAGAAGGAATGAAGCTGACCAGAGGCTATATATCTCCTTATTTTATTACTGATCATATGACCCAGAAATGTGAATTGGAGCATCCCCTTATACTAATCCATGAGAAGAAAATATCAGACATGAGGTCACTTGTGAAAGCATTGGAGCTAGCAAATGAGAAACATAGGCCACTTCTTGTTGTTGCGGAGGATGTTGAGAGTGATGCTTTGGCTATGCTCATACTCAACAAACATCGTGCTGGGCTTAAGGTTTGTGCTGTAAAAGCTCCAGGTTTTGGTGAAAATAGAAAAGCTGGTTTAGATGATCTAGCCATTCTTACAGGAGGAGAGGTCATCACAGAAGAACGAGGTTTGACCCTTGATAAAGTCCGGCCAGAAATGCTTGGGTCTGCCAGAAAGGTTACTGTTTCTCTTGATTATACTATTATTCTACATGGTGGTGGGGATAAGAAGCTCATTGAAGATAGATGTGAGCAGCTCAGGGCAGCAATTGAAGAGAGCACTGCCACATTTGATAAAGAGAAAGCACAGGAACGACTGTCAAAGCTGTCTGGTGGTGTAGCTATTTTCAAGGTTGGAGGGGCTAGCGAAGCAGAAGTTGGGGAAAGGAAAGATAGGGTGACCGATGCTTTAAATGCTACAAGAGCAGCCGTGGAGGAGGGAATTGTGCCAGGTGGTGGAGTTGCTCTGTTATATGCTAGTAAAGTATTGGAGAACCTCCAAACCCAAAACGAGGATGAGAAAAGAGGAGTAGAGATAATTAAGAGCGCACTTAAGGCACCTGCATTCACAATAGCTGCTAATGCTGGTTTTGATGGTGCTCTAGTTACTGGGAAATTGTTGGAACAAGACGACGATAAGTTTGGTTTTGATGCCGCCAAAGGTGCTTATGTTGACATGGTGAATTCTGGAATTATAGATCCTCTAAAAGTTGTCAGAACAGCATTGGTTGATGCTGCCAGTGTGTCATTGCTGCTGACTACGACTGAGGCTTGTGTGGTGGATGCTCCGACTAGTAAAGCTCCAAAACGTGTGGCAAATATGGATGAGTTGGACATCTAA 1719 0.4287 MYRAASKLASSFSSSSSRKLVHNRIISNRNYVAKDINFGIGARAAMLQGVSEVAAAVKVTMGPKGRNVIIEKSHGKLKITKDGVTVARSVNFEDKAKNLGAELVKQVAKATNTAAGDGTTCATVLTQAILIEGCKAIASGVNVMDLRNGINKAVDAVITDLKSRALMISTQEEITQVGTISANGERDIGELIARAMEKVGKEGVITVADGNTLHNELEVVEGMKLTRGYISPYFITDHMTQKCELEHPLILIHEKKISDMRSLVKALELANEKHRPLLVVAEDVESDALAMLILNKHRAGLKVCAVKAPGFGENRKAGLDDLAILTGGEVITEERGLTLDKVRPEMLGSARKVTVSLDYTIILHGGGDKKLIEDRCEQLRAAIEESTATFDKEKAQERLSKLSGGVAIFKVGGASEAEVGERKDRVTDALNATRAAVEEGIVPGGGVALLYASKVLENLQTQNEDEKRGVEIIKSALKAPAFTIAANAGFDGALVTGKLLEQDDDKFGFDAAKGAYVDMVNSGIIDPLKVVRTALVDAASVSLLLTTTEACVVDAPTSKAPKRVANMDELDI 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0463 572 PRINTS 60kDa chaperonin signature 298 321 IPR001844 GO:0042026|GO:0140662
Acco07g0463 572 PRINTS 60kDa chaperonin signature 113 140 IPR001844 GO:0042026|GO:0140662
Acco07g0463 572 PRINTS 60kDa chaperonin signature 57 83 IPR001844 GO:0042026|GO:0140662
Acco07g0463 572 PRINTS 60kDa chaperonin signature 380 405 IPR001844 GO:0042026|GO:0140662
Acco07g0463 572 PRINTS 60kDa chaperonin signature 428 449 IPR001844 GO:0042026|GO:0140662
Acco07g0463 572 SUPERFAMILY GroEL-intermediate domain like 168 236 IPR027410 -
Acco07g0463 572 Hamap Chaperonin GroEL [groEL]. 32 567 IPR001844 GO:0042026|GO:0140662
Acco07g0463 572 Coils Coil 369 396 - -
Acco07g0463 572 NCBIfam chaperonin GroEL 33 556 IPR001844 GO:0042026|GO:0140662
Acco07g0463 572 SUPERFAMILY GroEL apical domain-like 215 406 IPR027409 -
Acco07g0463 572 Gene3D GroEL 222 403 IPR027409 -
Acco07g0463 572 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 30 562 IPR001844 GO:0042026|GO:0140662
Acco07g0463 572 SUPERFAMILY GroEL equatorial domain-like 37 552 IPR027413 -
Acco07g0463 572 ProSitePatterns Chaperonins cpn60 signature. 435 446 IPR018370 GO:0005524|GO:0006457
Acco07g0463 572 Gene3D - 167 440 IPR027410 -
Acco07g0463 572 Gene3D - 36 553 IPR027413 -
Acco07g0463 572 FunFam 60 kDa chaperonin 222 403 - -
Acco07g0463 572 CDD GroEL 34 554 IPR001844 GO:0042026|GO:0140662
Acco07g0463 572 Pfam TCP-1/cpn60 chaperonin family 53 554 IPR002423 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0463 Acco-ChrAcco07 5517109 5522302 Dispersed