Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0460 ATGAACCTTTCCCAAAGCAGCAACAACAACAACAACCTTCACAACAACAACAACCAGGCTTGTGCTGCATGCAAATACCAACGTAAAAAATGTGCCCCTGACTGTATTCTCGCACCTTATTTTCCTCACGATCGCCAACGTCAATTTCTCAACGCCCATAAATTGTTCGGTGTCAAAAAGATCACCAAAATGATCAAAAACCTTGACCCCCGTGCTAAGGACGATGCCATGCGAGCGATCATATTTCAATCTGACATGCGAGCTGGTGACCCTGTTGGAGGATGTTACAGATACATTCTAGATCTTGAATCTCAGGTAAGATACTACGAGGCCGAGCACAAGATTGTTTTTCAAAAGCTTGCTTTTTATAGATCTCAGGTTCATTTTCATCATCATGATCATTTGAATCATGTTCATAATAATAACCCTATTGCGCCATTACAAACACCCACATTACAAACACCCACTCATTATCAGTACCTTCAACAACAACAACAACCAGAGCAACCACAACAAGAGCCGCAGCCGCCGTACATGGTTCATAAAATGGAACATCAGAATAGTAATGTGTCTCTTCAGTACCAACAACAAGAGCCGCGGCCGCCGTACATGTTTCATCAACATCAGAATAGTAATGTGTCGATGAAACATCAGAATAGTAATGTATCTCTTCAGGATGATCTTCAGGATGATGTTAGTGCTTGTTGGGCTTCCGTACAGGACTCCATGTCATTATTACAGAACAACAAGAATGGTGGGGTTGGGAATGGTATGAGTAGTGGCGTTTATGTAAGTGATGAATTTTGTAACGGTCAAAAGTCTTCATCGATGTCTTTGCTTGACATTCATGAGAGGAATGAAATCGGTTTTGAAACTCAAGAATTAGTGGATCGCAGTGATGAAGGCGTTTTGTTTAAGACGGAGAATGCAATAATAAAAGCAGAGGCTGATGATGATTGCATTCAACAAGATCATGATCTCAAAGGTGCTGCAACTTTGTTCACTCTCACAAACTGTACTACTTGA 1026 0.4113 MNLSQSSNNNNNLHNNNNQACAACKYQRKKCAPDCILAPYFPHDRQRQFLNAHKLFGVKKITKMIKNLDPRAKDDAMRAIIFQSDMRAGDPVGGCYRYILDLESQVRYYEAEHKIVFQKLAFYRSQVHFHHHDHLNHVHNNNPIAPLQTPTLQTPTHYQYLQQQQQPEQPQQEPQPPYMVHKMEHQNSNVSLQYQQQEPRPPYMFHQHQNSNVSMKHQNSNVSLQDDLQDDVSACWASVQDSMSLLQNNKNGGVGNGMSSGVYVSDEFCNGQKSSSMSLLDIHERNEIGFETQELVDRSDEGVLFKTENAIIKAEADDDCIQQDHDLKGAATLFTLTNCTT 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0460 341 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 181 - -
Acco07g0460 341 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
Acco07g0460 341 Pfam Lateral organ boundaries (LOB) domain 20 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0460 Acco-ChrAcco07 5503789 5506045 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0460 19 132 AS2 family AT3G13850 66.667 2.75e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco07g0460 LOB 6e-34 No_clan