Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0445 ATGTTTGAGAAAAAGATAGATGTTGTGTTGGATCCATGTTCCACCTTCATCAACAGAAATATGTCTACTTTGATGACTTCTTCTTCATCAGCTGAAGCCAATTTTTCAATTTATCCTCCTCCTCATCAACAACAACAATACTTGTCTTCTTCTTCTTCGTCTCAATCTCATCAGCCAATGAAGAAAAAAAGAAACCTCCCTGGCAATCCAGACCCAGAAGCAGAAGTGATTGCCTTGTCTCCAAACACTCTTTTAGCAACAAACAGGTTCATATGCGAGATCTGCAACAAAGGGTTTCAGAGGGACCAGAATCTGCAGCTACATAGAAGAGGGCACAATCTGCCATGGAAGCTGAAGCAGAGAACGAGCAAAGAGATAACAAGGAAGAAGGTGTATGTGTGTCCAGAACCTACGTGCGTTCACCATGACCCTTTAAGAGCACTTGGAGACCTAACAGGGATCAAGAAGCACTTTTGCAGAAAGCACGGTGAGAAGAAGTGGAAGTGTGATAAGTGTTCTAAGAGGTACGCTGTTCAATCTGATTGGAAGGCTCACTCCAAAACCTGCGGCACAAGAGAGTACAAATGTGACTGTGGGACTCTCTTCTCTAGGAGGGACAGTTTCATAACTCACAGAGCATTCTGTGATGCATTAGCAGAAGAAAGTGCGAGATCATCGTCATCAGGAAACCACCAAGTTCTTATTGTTCCCTCATCACAACCATTAGACACTTCTTATACTAATAATAATCTCCAAACGCAGTTCTTGAAAAACAAGATCGCTCTCACTTCTAGTCCTTCTTCTTCTTCTTCTAGTCTCATCAGGCAAGGCGTTCAGATTCCCTCTTGGATTGGTGGGCCCCCCACTAATTCTCAGCATCATCATCTTCTTAGCCATGACACCCCAAACCCTAACCCTTCTAGCCTGGGCCCCGCCACCACCACCACTAGTTTTCTTCCAGGTCCAGCTCCTTATTCTTCCCACATGTCAGCCACAGCCTTACTTCAGAAAGCGGCTCAGATCGGTTCAACCCTCAGCAAAACCGGTTCACCCATCCTCAGGACCCACACCAACCCTACCCAGCACAGTTCTGCTGCTATGGATCCTCAGGGCCACGTGACCATCACGACCAGCCATGGCTTCTTGTCTCCTTTCTCTTCTTCTACTTCTGATTTCGAGGAGGCTTTGATTATTAATGGTGGGATTTTGAATAATCCCCTCAAGAAAGATGCCGACAACTTGCACCGCGGCCATGGTGATGTTTTCAGAGCAACCGACTCTGCTAGCGGTGGCGGGAGAACAGGCGGCGGAGGCGTTGCGAACGTGGAGGGTTTGACGAGAGATTTCTTGGGTCTTCAACCTCTTTCCCATAATGACATTTTCACCATGGCTGGTTTTGGAAACTGCATGAGCTCCTCTACTTCTTCCTCCCGCCATGATCAACCAATTCGTCAATTCCAATGGCAAGCTTAA 1473 0.4657 MFEKKIDVVLDPCSTFINRNMSTLMTSSSSAEANFSIYPPPHQQQQYLSSSSSSQSHQPMKKKRNLPGNPDPEAEVIALSPNTLLATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEITRKKVYVCPEPTCVHHDPLRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARSSSSGNHQVLIVPSSQPLDTSYTNNNLQTQFLKNKIALTSSPSSSSSSLIRQGVQIPSWIGGPPTNSQHHHLLSHDTPNPNPSSLGPATTTTSFLPGPAPYSSHMSATALLQKAAQIGSTLSKTGSPILRTHTNPTQHSSAAMDPQGHVTITTSHGFLSPFSSSTSDFEEALIINGGILNNPLKKDADNLHRGHGDVFRATDSASGGGRTGGGGVANVEGLTRDFLGLQPLSHNDIFTMAGFGNCMSSSTSSSRHDQPIRQFQWQA 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0445 490 ProSiteProfiles Zinc finger C2H2 type domain profile. 90 112 IPR013087 -
Acco07g0445 490 Pfam Zinc-finger double-stranded RNA-binding 90 112 IPR022755 -
Acco07g0445 490 FunFam protein indeterminate-domain 5, chloroplastic-like 145 224 - -
Acco07g0445 490 MobiDBLite consensus disorder prediction 471 490 - -
Acco07g0445 490 MobiDBLite consensus disorder prediction 280 318 - -
Acco07g0445 490 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 35 471 IPR031140 -
Acco07g0445 490 Gene3D Classic Zinc Finger 69 137 - -
Acco07g0445 490 SMART c2h2final6 90 112 IPR013087 -
Acco07g0445 490 SMART c2h2final6 132 162 IPR013087 -
Acco07g0445 490 SMART c2h2final6 167 187 IPR013087 -
Acco07g0445 490 MobiDBLite consensus disorder prediction 34 74 - -
Acco07g0445 490 FunFam protein indeterminate-domain 12-like 69 138 - -
Acco07g0445 490 MobiDBLite consensus disorder prediction 34 62 - -
Acco07g0445 490 SUPERFAMILY beta-beta-alpha zinc fingers 89 187 IPR036236 -
Acco07g0445 490 Gene3D Classic Zinc Finger 147 225 - -
Acco07g0445 490 ProSitePatterns Zinc finger C2H2 type domain signature. 92 112 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0445 Acco-ChrAcco07 5345634 5348511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0445 42 475 IDZ Gene Family AT1G55110 49.446 4.09e-122 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco07g0445 zf-C2H2_jaz 7.1e-05 CL0361