LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco07g0431	ATGAGTAATTTAAGATTTCTCAGGATTGAACCTCTCCAAGTGAAGATCATTGGATCTCTTTTTGAAAGCAAAAATATCGTGCATTTTCCTAACGGCCTGAAGTCACTTTCTAATGAGCTCAGGTACTTCAGCTGGAGTGGTTATCCTTTGAAATCCTTGCCACACGGTTTTAGGCCGAAGAAACTTGTTGAAATCCATATGCCTTTTAGCAGAGTTGTAAAACTATGGGATGGTGTGCAGGATCTTATGAATCTAAGGAAAATAGATCTTAGCTATTCCAAAGAGTTAAAGGAGTTGCCTGATTTTTCTATGGCACTAAATCTTGAAATACTGGACCTCGAATGGTGTCAAAATTTATGCAGTATTCATCCATCTATCTTTTCTCTTCCTAAACTTGTTTCTTTGAATCTAAGGGCATGCCACAATCTAAAGAACCTTCACAGCAATAACCATTTGAAATCTCTCAAGAATCTCACGCTATCCGGTTGCTTTAGTCTCAAGGAACTTTTGTTGCCATTAGTAGAAGTGAGAAGATTAGATTTAGTTGAAACTGGTATAGAAACATTGGAGTTGCCAATTGGACAGCTCAATAAAATTGAAGAGCTATATCTCGGTGGGCTCTATGGGCGTCTCAAGAGCATTGAAATAAATGAGCTTAGGTGCTTGACATCTCTTAAAAAATTCTCTCTTTCTCGGTTTAGAGAAGGAATTGACAAATCAAAATTAGTCGTTCTTTTTGATGCCTGGCGTTGTTTAGAAGAATTTTGTTTGGAGGACTGCGTGGTTTCTGAGATACCTAATAATATCAGTGGCCTGTCATTTCTGAAGATTCTATCACTACGAAATTGCGGCGTGGAGAAATTGCTCACAAGCATCAAGCATCTTTCAAAGCTGAAAGAAATTGATTTGGGTCATTGCTACAGACTTGGGTCATTACCAGAACTTCCACCTTCCGTTACTCGATTATATGTCGAAAATTGCATTTATTTGAAGACTTTTGATTTCAAATTGATGCCAGCAATATTATATTACAACAACTCTTGTGAGGTTAGAGTTTGTTACACAGGAAACACAATTCCAAAGGGCTTCAGATATTTTCAGATGGGGGAGAGTTCCATCACTATAGAGCTTGCACCACCTTCTTCTGACCATTTGTTGGGTTTTGTTAGTTGTTGTATTGCTCGTCCATTTTTTGGAAGCCGTATCATTTCATCAGTTATCAGAAAATTCCACTTTGAAGATGAAGAGATCAATTACAAAGATGAAAAGGAATTTCTTCGCCGAGGGTATTTGGAAGCAGATATTGTTTTTCTATGGGTGCGGAATTTGGCCTATATACGCATCAGAATTACAACAGCTTCAACAAATGGAATTGAAGCTTTGGAAGAAGCAATAATAGTGCCCTGA	1407	0.3781	MSNLRFLRIEPLQVKIIGSLFESKNIVHFPNGLKSLSNELRYFSWSGYPLKSLPHGFRPKKLVEIHMPFSRVVKLWDGVQDLMNLRKIDLSYSKELKELPDFSMALNLEILDLEWCQNLCSIHPSIFSLPKLVSLNLRACHNLKNLHSNNHLKSLKNLTLSGCFSLKELLLPLVEVRRLDLVETGIETLELPIGQLNKIEELYLGGLYGRLKSIEINELRCLTSLKKFSLSRFREGIDKSKLVVLFDAWRCLEEFCLEDCVVSEIPNNISGLSFLKILSLRNCGVEKLLTSIKHLSKLKEIDLGHCYRLGSLPELPPSVTRLYVENCIYLKTFDFKLMPAILYYNNSCEVRVCYTGNTIPKGFRYFQMGESSITIELAPPSSDHLLGFVSCCIARPFFGSRIISSVIRKFHFEDEEINYKDEKEFLRRGYLEADIVFLWVRNLAYIRIRITTASTNGIEALEEAIIVP	468

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco07g0431	468	SUPERFAMILY	L domain-like	29	348	-	-
	Acco07g0431	468	Pfam	Leucine Rich Repeat	61	80	IPR011713	-
	Acco07g0431	468	Gene3D	Ribonuclease Inhibitor	170	347	IPR032675	-
	Acco07g0431	468	Gene3D	Ribonuclease Inhibitor	1	169	IPR032675	-
	Acco07g0431	468	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	1	171	IPR044974	GO:0006952

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco07g0431	Acco-ChrAcco07	5098310	5099936	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco07g0431	15	395	WRKY Transcription Factor Family	AT5G45050	31.105	2.68e-29	120